Pseudomonas putida W619: PputW619_4479
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Entry
PputW619_4479 CDS
T00675
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppw
Pseudomonas putida W619
Pathway
ppw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PputW619_4479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppw03021
]
PputW619_4479
Transcription machinery [BR:
ppw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PputW619_4479
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_23
HTH_11
HTH_38
HTH_7
HTH_DeoR
HTH_29
HTH_17
HTH_3
HTH_IclR
HTH_31
MarR_2
HTH_28
HTH_6
HTH_AraC
HTH_40
HTH_Tnp_ISL3
HTH_24
TetR_N
MarR
HTH_20
HTH_22
LacI
GerE
Motif
Other DBs
NCBI-ProteinID:
ACA74959
LinkDB
All DBs
Position
4943375..4943890
Genome browser
AA seq
171 aa
AA seq
DB search
MQLNDTLKPAEVALLYQSHHAWLRGWLRSRVGCQEHAADLAQDTFVRLLRARQVSPIKEP
RAYLSSIARGLMIDQFRRRALERAYQESLAHVPAGEVPSEEHRLVILDALERLDRALHQL
RPRARQAFLLAQLDGLSIAQIALRLGVSRATVERDLAKALGVCYRLRYAEL
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaacgacacgctcaaaccggccgaagtcgccctgctctatcagtcccatcac
gcttggctacgtggctggctgcgcagccgggtcggctgccaggaacacgccgcagacctt
gcgcaggacaccttcgtgcgcctgctgcgcgcgcgccaggtttcgccgatcaaagaaccg
cgggcttacctgagcagcatcgcacgcggcctgatgatcgaccagttccgccgtcgcgcc
ctggagcgcgcctaccaggaaagcctcgcccatgtacccgcaggcgaagtacccagcgaa
gagcatcgcctggtgattctggatgccctcgagcgccttgaccgcgccctgcaccagctc
aggccccgcgcccgtcaggcctttttgctggcccagctcgatggcctgagcatcgcgcag
atcgcccttcgccttggcgtttcgcgtgccaccgtcgaacgcgacctggccaaggctctg
ggcgtctgctaccggttgcgctatgccgagctctga
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