Pseudomonas putida W619: PputW619_4517
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Entry
PputW619_4517 CDS
T00675
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw00061
Fatty acid biosynthesis
ppw00071
Fatty acid degradation
ppw01100
Metabolic pathways
ppw01212
Fatty acid metabolism
ppw02024
Quorum sensing
ppw04146
Peroxisome
Module
ppw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PputW619_4517
00071 Fatty acid degradation
PputW619_4517
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PputW619_4517
09145 Cellular community - prokaryotes
02024 Quorum sensing
PputW619_4517
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppw01004
]
PputW619_4517
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppw04147
]
PputW619_4517
Enzymes [BR:
ppw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PputW619_4517
Lipid biosynthesis proteins [BR:
ppw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PputW619_4517
Exosome [BR:
ppw04147
]
Exosomal proteins
Exosomal proteins of breast milk
PputW619_4517
Exosomal proteins of breast cancer cells
PputW619_4517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ACA74997
UniProt:
B1JF33
LinkDB
All DBs
Position
complement(4986916..4988397)
Genome browser
AA seq
493 aa
AA seq
DB search
MISKKMQDYLAATPDRIVIREMDGRTHTLHELRRDVMRLASALEGRVGRCERKVFGIAMR
SCYEWVYTLLAIQKVGAVLLPVPIEFSDDQIGSLLGKAAAVFVSDEKTANRLHGILPDKA
CFIPGQLMNQAIGEEWRNEDELIPEGIVSIIHTSGTTSKPKGVMIRDEAVGLLVDNVMKR
LPQQPLHYFSIVPMSLLIEQVLGVFIPILSGGTLTLMPEGVTEYGAASGNARQYLELIAP
NQPNFLYLPPKLLEEANGLLEHCTVEQLFGPQRPHIITGGAKIPATVLEALEARGVQVFE
AYGLSENSSIISLNSPAERRIGSAGKLLDGIEPKLVDGELLVRTPTLCAGYYNADDTACD
LSDGYLHTGDIAEFRDGYLYITGRKKHVIILSTARNISPEWVENVYKESPLVDDMIVMGE
GRDEPCAIVLSAAGAERVRSEMARLEHRLADFARVRQVRVIEDIALFREQFYTVTGRPRR
AEIEARFIDQMYA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcaagaaaatgcaggactacctggcggcaacgcccgaccgcatcgtcatccgt
gagatggatggccgcacccatacgctgcacgaactgcgtcgcgatgtgatgcgcttggcc
agtgcccttgaagggcgtgtggggcgctgtgaacgcaaggtattcggtatcgccatgcgc
tcatgctacgagtgggtctacacgctactggccattcagaaagtcggtgcggtgctgttg
ccggtgcccatcgagttttccgacgaccagatcggcagcctgctgggcaaggccgcagcg
gtgttcgtcagcgatgaaaaaaccgccaaccgcctgcacggcatcctgccggacaaggcc
tgcttcattccgggccagctgatgaaccaggccatcggcgaggagtggcgcaacgaggat
gagttgatcccggagggcatcgtttcgatcatccatacctcaggcaccacctccaaaccc
aagggggtgatgattcgcgacgaggcggtggggctgttggtggacaacgtcatgaagcgt
ctgccacaacaaccgctgcactacttctcgatcgtgccgatgagcttgttgatcgagcag
gtgctcggcgttttcatcccgatcctgtcgggcggtacgctgacgttgatgcccgagggc
gtgaccgaatatggcgcggcgagcggcaatgcccggcagtacctggagctgattgcaccc
aaccagcccaatttcctgtacctgccgcccaagttgcttgaggaggccaatgggctgctt
gagcattgcacggtcgagcagctgttcggcccgcaacggccgcacatcatcaccggtggc
gcgaagattccggccacagtgctggaggcgctggaagcgcgcggcgtgcaggtgttcgag
gcgtatggcctgagcgagaactcatcgatcatctcgctgaattcgcccgccgagcggcgc
attggctctgcgggcaagctgctcgacggtatcgaacccaagctggtcgatggcgaactg
ctggtgcgcacgccgaccctgtgcgcggggtactacaacgctgacgataccgcctgcgac
ctgtccgacggctacttgcataccggtgatatcgccgaatttcgcgacggctacctctac
atcaccgggcgcaagaaacacgtgatcatcctctccacggcgcgcaacatctcgccggag
tgggtggagaacgtctacaaggagagcccgctggtggacgacatgatcgtcatgggggaa
ggcagggacgagccgtgcgccatcgtgctcagtgctgcgggcgcggagcgcgtacgcagc
gaaatggcgcgcctggaacatcgccttgccgatttcgcccgggttcgccaggtgcgcgtc
atcgaggatatcgctttgttccgcgagcagttctacaccgtcaccgggcggccgcggcgc
gcggaaatcgaggcccgcttcatcgatcagatgtacgcctga
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