Pseudomonas putida W619: PputW619_4693
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Entry
PputW619_4693 CDS
T00675
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PputW619_4693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppw03019
]
PputW619_4693
03009 Ribosome biogenesis [BR:
ppw03009
]
PputW619_4693
Messenger RNA biogenesis [BR:
ppw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PputW619_4693
Ribosome biogenesis [BR:
ppw03009
]
Eukaryotic type
Pre-60S particles
RNases
PputW619_4693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ACA75170
UniProt:
B1JAE2
LinkDB
All DBs
Position
complement(5182539..5183081)
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGGSGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMR
SLENYFHYRNLDVSTVKELAARWAPDVRDSFKKGSTHLALDDIRESIAELRHYRTHFIKV
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacccacagaacctgatctggatcgatctggaaatgaccggcctggatccggac
agcgacgtcatcatcgagatggccaccatcgtcaccgacagcgagctgaacacgctggcc
gaagggccggtgatagccatccaccacagtgacgaagtgctggcgcgcatggatgagtgg
aatacccgcacccatggtggctcggggctgacccagcgtgtacgcgaaagcaaggtcagc
atggccgaggccgaagcgcagaccatcgccttcctggaacaatgggttcccaaaggcaag
tcgccaatctgtggcaacagcatctgccaggaccgccgcttcctctatcgccatatgcgc
agcctggaaaactacttccactaccgcaaccttgatgtctccaccgtgaaggagcttgct
gcgcgctgggcaccggacgtgcgggacagcttcaagaagggcagcacccacttggcgctg
gacgatatccgcgagtctatcgccgaactgcgccactaccgtacgcacttcatcaaggtg
tga
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