Pseudomonas putida W619: PputW619_4714
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Entry
PputW619_4714 CDS
T00675
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw00730
Thiamine metabolism
ppw01100
Metabolic pathways
ppw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PputW619_4714
Enzymes [BR:
ppw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PputW619_4714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
DUF6110
Motif
Other DBs
NCBI-ProteinID:
ACA75191
UniProt:
B1JAG3
LinkDB
All DBs
Position
complement(5204683..5206569)
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AA seq
628 aa
AA seq
DB search
MSKQEKTINLSESAQVDQQSVQPFPRSRKIYVEGSRPDIRVPMREISLHDTPTDFGGEAN
APVLVYDTSGPYTDPDVIIDVRKGLADVRSAWIDARGDTERLGGLSSNFGQQRLNDAELA
KLRFNHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAIRENMKLQEARAAGLLKQQHAG
HSFGANIPKEITAEFVREEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGS
SIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGVA
EDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHH
QENFLYTHFDEICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKHD
VQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGW
FGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEF
RWEDQFNLGLDPDTARAFHDETLPKESAKVAHFCSMCGPKFCSMKITQEVREYAANLRID
AVDVSVEEGMREQAERFRQEGSQLYHKV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacaagaaaaaacgatcaacctcagcgagtcggcgcaagtcgatcagcagtcc
gtgcaacccttcccgcgttcgcgcaagatctatgtcgagggctcgcgcccggacatccgc
gtgccgatgcgcgaaatcagcctgcacgacacccccaccgacttcggcggcgaagccaac
gcgccggttctggtctacgacacttccggcccctacaccgatcccgacgtcatcatcgat
gtgcgaaaaggcctggccgatgtgcggtcggcctggatcgacgcccgtggcgataccgag
cgcctgggtgggctgagctcgaacttcggccagcagcgcctgaacgacgccgaactggcc
aagctgcgcttcaaccatgtgcgcaacccgcgccgcgccaaggctggcgccaacgtctcg
cagatgcactacgcccgccaaggcatcattaccgccgagatggaatacgtcgccatccgc
gagaacatgaagctgcaggaggcccgcgctgctggcttgctcaagcagcagcacgccggc
cacagcttcggcgccaacatccccaaagagatcaccgccgaattcgtgcgcgaggagatc
gcccgcggccgcgcgatcatcccggccaacatcaaccacacggaactggagccgatgatc
atcggccgcaacttcctggtgaagatcaacggcaacatcggcaacagcgccctgggctcc
tcgatcgaggaggaagtggccaagctgacctggggtattcgctggggctcagacacggtc
atggacctttcgaccggcaagcacatccacgaaactcgtgagtggatcatccgcaactcg
ccggtacctatcggtaccgtgccgatctaccaggccctggaaaaggtcggaggggttgcc
gaggacctgacctgggagctgttccgcgacacgctgatcgagcaggctgagcagggcgtg
gactacttcaccatccatgctggcgtgctgctgcgctacgtgccgctgaccgccaagcgg
gtcaccggtatcgtcagccgcggggggtcgatcatggccaagtggtgcctggcgcatcac
caggagaacttcctgtacacgcatttcgatgagatctgcgaaatcatgaaggcctacgac
gtgagcttctctctcggtgacggcctgcgcccaggctcgattgcagatgccaacgacgcg
gcgcagttcggtgagctggaaacacttggcgaactgaccaagatcgcctggaagcacgac
gtgcagtgcatgatcgaaggccctggccatgtgccgatgcaactgatcaaggagaacatg
gacaagcagctggaatgctgcgacgaagcgccgttctacaccctcggccctctgaccacc
gacattgcgcctggttacgaccacatcacctcgggcatcggcgcggccatgatcggctgg
ttcggctgcgccatgctgtgctacgtcacccccaaggagcacctgggcctgccgaacaag
gatgacgtcaagaccggcatcatcacttacaagatcgccgcgcatgctgccgaccttgcc
aaaggccacccgggcgcgcagatccgtgacaatgccctgtccaaggcgcgtttcgagttc
cgctgggaggaccagttcaacctgggcctggaccctgacaccgcgcgtgccttccacgac
gaaaccctgccgaaggaatcggccaaggtcgcgcacttctgctcgatgtgcgggccgaag
ttctgctcgatgaaaatcacccaggaagtacgggaatacgccgccaacctgcgcatcgat
gcggtggatgtatcggttgaggaggggatgcgcgagcaggccgaacggttccgccaggaa
ggcagccagctgtaccacaaggtgtaa
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