Pseudomonas putida W619: PputW619_4885
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Entry
PputW619_4885 CDS
T00675
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw00260
Glycine, serine and threonine metabolism
ppw00460
Cyanoamino acid metabolism
ppw00630
Glyoxylate and dicarboxylate metabolism
ppw00670
One carbon pool by folate
ppw00680
Methane metabolism
ppw01100
Metabolic pathways
ppw01110
Biosynthesis of secondary metabolites
ppw01120
Microbial metabolism in diverse environments
ppw01200
Carbon metabolism
ppw01230
Biosynthesis of amino acids
ppw01240
Biosynthesis of cofactors
ppw04981
Folate transport and metabolism
Module
ppw_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PputW619_4885
09102 Energy metabolism
00680 Methane metabolism
PputW619_4885
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PputW619_4885
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PputW619_4885
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PputW619_4885
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PputW619_4885
Enzymes [BR:
ppw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PputW619_4885
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ACA75361
UniProt:
B1JEA0
LinkDB
All DBs
Position
complement(5394623..5395876)
Genome browser
AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEAQEPEFKSYQKQVIENAQAMAQ
VFIDRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCVALAGWICDILDNLGDADVEADVAKNVAALCTDFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgacgcactgctggcggcgatgaat
gccgaagaacagcgccaggaagatcacatcgagctgatcgcctcggagaactacaccagc
aagcgcgtcatgcaggcccaaggcagcggcctgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggctgcgagcacgtcgacaaagtcgaggcgctggccatcgag
cgcgccaagcagctgttcggtgccgactacgccaacgttcagccacattccggctcttcg
gccaacagcgccgtgtatctggctctgctgcaggccggtgacaccatcctgggcatgagc
ctggcccacggcggccacctgacccacggcgccaaagtgtcgtcctcgggcaagctgtac
aacgcggtgcaatacggcatcgacaccaacaccggtctgatcgactacgacgaagtcgag
cgcctggccgtcgagcacaagccgaagatgatcgttgccggcttctcggcctattccaag
accctcgacttcccgcgttttcgcgccatcgcagacaaggtcggtgcgctgttgttcgtc
gacatggcccacgttgccggcctggttgccgctggcctgtacccgaacccgatcccgttc
gccgacgtggtgaccaccactacccacaagaccctgcgcggcccacgtggcggcctgatc
ctggccaagtcgaacgaagagatcgagaaaaagctcaacgccgccgtcttccccggcgcc
cagggcggcccgctgatgcacgtcatcgcagccaaggctgtgtgcttcaaggaagctcag
gagcctgagttcaagagctaccagaagcaggtcatcgagaacgcccaggccatggcccaa
gtgttcatcgaccgcggctacgacgtggtctccggcggtaccgacaaccacctgttcctg
gtcagcctgatccgccagggcctgaccggcaaagatgccgacgctgccttgggccgcgcg
cacatcaccgtcaacaaaaacgctgtgccgaacgacccgcagtcgccgttcgtcacttcc
ggcctgcgcatcggcaccccggctgtcaccacacgcggcttcaaggtcgcccagtgtgtg
gccctggccggctggatctgcgacatcctcgataacctcggtgacgctgatgtcgaagcc
gatgtggcgaagaacgtcgcggctctgtgcacagacttccctgtttaccgctga
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