Pseudomonas putida W619: PputW619_5130
Help
Entry
PputW619_5130 CDS
T00675
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw03420
Nucleotide excision repair
ppw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PputW619_5130
03430 Mismatch repair
PputW619_5130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppw03400
]
PputW619_5130
Enzymes [BR:
ppw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PputW619_5130
DNA repair and recombination proteins [BR:
ppw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PputW619_5130
MMR (mismatch excision repair)
Other MMR factors
PputW619_5130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACA75606
UniProt:
B1JFM2
LinkDB
All DBs
Position
5689936..5692125
Genome browser
AA seq
729 aa
AA seq
DB search
MHTDDLSLLLNSLNDAQRQAVAATLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSI
LSVTFTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEARLVQNFQILDSD
DQQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLGTMRSIYEAY
EQACERAGVIDFSELLLRALDLWRDHPGLLEHYQRRFRHLLVDEFQDTNAVQYAWLRLLA
GKGGGSLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAEMIRLEQNYRSTGGILKAANAL
IANNSGRLGKELWTDLGEGEPLTLYAAYNEHDEARYVVETIESLIKQGNSRSDIAILYRS
NAQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLIEGRGNDAALERVINVPPR
GIGEKTVEAIREHARHSQLSMWGAMCQLLAAKALKGRAASALGAFIELIESLAGKVADMP
LHTMTQTVVEQSGLIIYHQEEKGEKGQARVENLEELVSAARNFETTDDDADLSPLSAFLG
HASLEAGEAQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEER
RLAYVGITRAMRQLFMTYAETRRLYGSETYNKVSRFVREIPPGLVQEVRLSNSVSRPFGG
AKSTSASSLFANANIPQTAFNLGQRVQHSVFGEGVILNFEGSGAQARVQVNFAEGSKWLM
LGYAKLEAI
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcacacagatgacctctcactcctgctgaattccttgaacgatgcccaacgccaggcc
gtcgcggccacgctcgggcgtcagctggtgcttgctggcgccggttccggtaaaacccgc
gtgctggtgcatcgcatcgcctggctgatccaggtcgagcaggcctcaccgcactcgatc
ctgtcggtgaccttcaccaacaaggctgccgccgaaatgcgccagcgtatcgagcaattg
ctgggcatcaacccggccggcatgtgggtggggaccttccacggtctggcgcatcggttg
ttgcgcgcccactggcaggaagcgcgcctggtacagaatttccagatcctcgacagtgat
gaccagcagcgcctggtcaagcgggtgatccgtgagcttggtctcgacgagcagcgctgg
cccgcgcgccaggcacagtggttcatcaacgggcagaaggacgaaggcctgcgcccgcag
catatccaggccagcggcgacctgttcctggggaccatgcgtagcatctatgaagcctac
gaacaggcctgcgaacgcgcgggagtgatcgacttctccgaactcctgctgcgtgccttg
gacctgtggcgcgaccacccgggcctgctcgaacactaccagcggcgcttccgccacctg
ctggtggacgagttccaggacaccaacgccgtacagtacgcctggctgcgcctgctggct
ggcaagggcggcggaagcctgatggccgtaggcgacgacgaccagtcgatttacggctgg
cgcggcgccaagattgaaaatattcaccagtacacggctgacttccctgacgccgagatg
atccgcctggagcagaactaccgctccaccggcggcatcctcaaagccgccaacgcgctg
atcgcaaacaacagcgggcgcttgggcaaagagctttggaccgatctgggcgagggcgag
cctttgaccctttatgcggcttacaacgagcatgacgaagcgcgctacgtggtcgagacc
attgaaagcctgatcaagcaaggcaattcgcgcagcgacatcgccatcctgtatcgctcc
aacgcccagtcgcgggtgctggaagaagccctgctgcgcgagcgcatcccctaccgcatc
tatggtggccagcgcttcttcgaacgcgccgagatcaagaacgccatggcttacctgcgc
ttgatagaaggccgtggcaacgacgccgccctcgaacgggtcatcaatgtgccaccgcgt
ggcattggcgagaaaactgtcgaggccattcgtgaacatgcccgccacagtcaactgtcg
atgtggggggccatgtgccaactgctcgccgccaaggcactcaaaggccgggcagccagt
gcgctgggcgctttcatcgagctgatcgagagcctggctggcaaagtcgcggacatgccc
ctgcataccatgacgcagacagtcgtcgagcagtccggactgatcatctatcaccaggaa
gaaaagggtgaaaagggtcaggcacgggtagaaaaccttgaggaactggtcagcgcagca
cgaaacttcgaaaccactgacgatgacgccgacctttcgccgctgtcggccttcctcggt
catgcttcgcttgaagccggcgaggcccaggctgacgagcacgaagacagcattcagctg
atgacgttgcatagcgccaagggcctggaattcccctacgtcttcctggtgggcatggaa
gaaggcctgttcccgcacaagatgagcctggaagagccaggccgcctggaagaagagcgc
cgactggcgtacgtgggcattacccgtgccatgcgccagctattcatgacctatgccgaa
acgcgtcgcctgtatggcagtgaaacctacaataaggtgtcacgattcgtacgggaaatt
ccgccaggcctggttcaggaagtgcgtctttcgaacagcgtcagccgcccgttcggcggc
gccaagagcaccagcgccagcagcctgttcgccaatgccaacattccccagaccgctttc
aatctgggccagcgggtacagcattcggtattcggtgaaggtgtgatcctcaacttcgag
ggttccggcgcacaggcgcgcgtgcaggtgaactttgccgaaggcagcaagtggctgatg
ctgggctatgccaagctcgaagctatctga
DBGET
integrated database retrieval system
