Pseudomonas putida DOT-T1E: T1E_0047
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Entry
T1E_0047 CDS
T02181
Name
(GenBank) hypothetical protein
KO
K11893
type VI secretion system protein ImpJ
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
T1E_0047
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppx02044
]
T1E_0047
Secretion system [BR:
ppx02044
]
Type VI secretion system
Imp/Vas secretion system core components
T1E_0047
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
aSelB_III
Motif
Other DBs
NCBI-ProteinID:
AFO45906
UniProt:
I7BYJ1
LinkDB
All DBs
Position
complement(50583..51920)
Genome browser
AA seq
445 aa
AA seq
DB search
MSSRNPVLWPEGLFVKPQHFQQAARASEAALHQRLGSLNAAFYGFSELQLSTEYLSLGKV
AITKARGIMPDGTVFDIPADLPPPPPLEIEDDGSKDSEIFLCLPLRTEGGREVSWPDNAA
NFRYNAQAEEIKDTHSADGDLVQVDLAVPNLQLKRKADDSSAYTRLAVARILERRPDGSL
QLDETFYPTSVSVRAVPALQRFLEEITNTLRERARNLAARIGASGQSGIADIRDFNLLQA
MNRWWPCFNHLARQGQTHPEQLYLSMSQACGEFVTFTDENRLPQEYPAYHHTALRTSFKP
LEDTLRRALSTVLQPRAVSLPLETLDFGVMTTTLEDRRLINEADFIIAVRADLPPQTLRQ
MFIQKAKVTSLESLNDLVPLQLPGIPLLPLPVAPRDLPFHAGFSYFELDRRDPAWACMKT
ANGFGFHVAGEFPGLELQFWAIRGE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgtaaccccgttctgtggcccgaaggcctgttcgtcaaaccgcagcatttc
caacaagctgcgcgggccagtgaagcggccttgcatcaacgccttggcagcctcaacgcg
gccttctacggcttcagcgaactgcagctgagcaccgaatacctgagcctgggcaaggtc
gccatcaccaaggcgcgcggcatcatgcccgatggcacagtgttcgatattcctgccgat
ctgccgccgccgccgcccctggaaatcgaggacgacggttcgaaagacagcgagatattc
ctgtgcttgccgctgcggaccgagggcggccgtgaagtgagctggcccgacaatgccgcc
aacttccgctacaacgctcaggcagaggagatcaaggatacccacagcgccgacggtgac
ctggtgcaggtcgacctggccgtgcccaacctgcagctcaagcgtaaagccgatgacagc
agtgcctacacccgcctggccgtggctcgtatcctggaacggcgccccgacggtagcctg
caattggatgaaacgttctaccccaccagcgtttcggtgcgggcagtgccggcccttcag
cgtttccttgaagagatcaccaacaccctgcgcgagcgtgcgcgcaatcttgccgcccgc
atcggcgcttcgggccagtcgggtatcgccgacatccgcgacttcaacctgctgcaggcc
atgaaccgctggtggccgtgcttcaaccacctggccaggcaaggacaaacacaccccgag
cagttgtacctgtccatgagccaggcgtgtggcgaattcgtcaccttcaccgacgagaac
cggctgccgcaggaatacccggcctaccaccacaccgcactgcgtacctcgttcaagccc
ctggaggatacgctccgtcgagccctgagcacggtcctgcaaccccgcgccgtgtcactg
ccgctggagaccctggactttggtgtgatgacgaccacgctggaagaccggcgcctgatc
aacgaagccgatttcatcatcgccgtgcgcgccgacctgccgccgcaaacgttgcgccag
atgttcatacagaaagccaaggtcacctcactcgaatccttgaatgacctggtgcctttg
caactgccgggcatcccgctgctgcccctgccggttgctccacgcgacctgcccttccat
gcgggcttcagctacttcgaactggaccgccgtgaccccgcctgggcctgcatgaagacg
gccaacggcttcggcttccacgttgcaggtgagttcccagggcttgaactgcagttctgg
gcgatcaggggtgaatga
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