Pseudomonas putida DOT-T1E: T1E_0053
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Entry
T1E_0053 CDS
T02181
Name
(GenBank) hypothetical protein
KO
K11900
type VI secretion system protein ImpC
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
T1E_0053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppx02044
]
T1E_0053
Secretion system [BR:
ppx02044
]
Type VI secretion system
Imp/Vas secretion system core components
T1E_0053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
AFO45912
UniProt:
I7BP82
LinkDB
All DBs
Position
complement(56130..57617)
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AA seq
495 aa
AA seq
DB search
MPKPSTTVTVETQAETLSNATLLDQIMAETKLVPTQEGYQVARQGVSAFIAEILKSHDPD
QLINKHRVDQMIAELDRVLSKQMDAILHEPAFQQLESAWRSLKLLVDRTDFRENIKLEVL
HVSKEDLLDDFENAADITCSGIYKHVYTAGYGQFGGEPVAAMVGNYNFGPSSPDIKLLSY
MASVGAMSHAPFIAAPSPEFFNLSSFEALPNLKEIKDIFAGPRHAKWRAFRESEDARHIA
LTGPRFMLRSAYHHQDQPISSFHYDENINGRHDNYLWGSSAFLLASCINDSFARYRWCPN
IIGPQSGGAVEGLPVHLYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAA
FFSANSVQKPKNFPKTPEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKERR
DLESELNKWIKQYVADQENPSADVRSRRPLRAARVEVSDVAGDPGWYQVSLAVRPHFKYM
GANFEISLVGRLDTQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagccaagcacaactgtcactgttgaaacacaggccgaaacactgagcaatgcc
accttgctcgaccagatcatggcagagaccaagttggttcccacacaagagggttaccaa
gtggccaggcagggtgtatccgccttcattgccgaaattctaaaaagtcatgacccagat
caattgatcaacaaacatcgcgtcgaccagatgattgccgagctggatcgggtcctcagc
aagcagatggatgccattctgcatgaacccgcgttccagcaacttgaatccgcgtggcgc
agcctcaaacttctggtcgaccgtacggactttcgcgagaacatcaagctcgaagtcttg
cacgtcagcaaggaagacttgctcgatgatttcgagaacgccgccgacattacctgcagt
ggtatttataaacacgtctataccgccggttacggccagttcggtggcgagccggtcgcg
gccatggttggcaattacaacttcggcccctcttcgcctgatatcaaactgttgagctac
atggcatccgtcggcgccatgtcgcatgcgcccttcattgcggcaccctcccccgagttc
ttcaacctcagcagcttcgaagcgctacccaatctgaaagaaatcaaagacatcttcgcc
ggcccacggcatgccaagtggcgcgcgttccgcgagagcgaagatgcccgccacatcgcg
ctgaccgggccgcgcttcatgctgcgctccgcctaccatcaccaggaccagccgatcagc
agcttccattacgatgagaacatcaacggccggcacgacaattacctgtggggcagctca
gccttcctgttggccagctgcatcaacgacagctttgcccgctaccgctggtgccccaac
atcatcggcccgcaatcgggaggtgccgtcgaaggcctgccggtgcatctgtacgaatcg
ctgggccagctgcaggccaagattcctaccgaggtactgatttccgaccgcaaggaattc
gagctggccgaagagggctttatcgccctgaccatgcgcaaggacagcgacaacgccgcg
ttcttctcagccaactcggtgcaaaagccgaaaaacttccccaagacacccgaaggcctg
caggcacagaccaactacaagctcggcacccaactgccctacctgttcatcgtcaatcgc
ctggcccactacatcaaggtgttgcagcgcgagcagatcggcagctggaaggagcgacgg
gaccttgagtccgaactcaacaaatggatcaagcaatacgtcgccgaccaggaaaaccct
tcggccgatgtgcgcagccgtcggccgttgcgtgctgccagggtcgaggtctcggacgtg
gcgggtgatccgggctggtaccaggtctcgctcgccgtgcgcccgcacttcaagtacatg
ggcgcgaacttcgaaatttccctggtaggccggctcgacacgcaatga
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