Pseudomonas putida DOT-T1E: T1E_0092
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Entry
T1E_0092 CDS
T02181
Name
(GenBank) ECF subfamily RNA polymerase sigma-24 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
T1E_0092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppx03021
]
T1E_0092
Transcription machinery [BR:
ppx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
T1E_0092
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
PhyR_sigma-like
HTH_23
Sigma70_r4
GerE
HTH_29
HTH_11
HTH_Tnp_ISL3
HTH_24
HTH_40
HTH_28
HTH_7
HTH_36
MPAB_Lcp_cat
HTH_10
PapC_N
Motif
Other DBs
NCBI-ProteinID:
AFO45951
LinkDB
All DBs
Position
104850..105353
Genome browser
AA seq
167 aa
AA seq
DB search
MPSNDSVQTLYSDHHGWLHTWLRSKLGNAADAADLAQDTFVRLLQRREQLQLNTPRAFLR
TVARGLVIDHWRREELHRAYLEALAHVPEALAPSVETRELLLELLERIARMLDGLKPKVR
RAFLLAQCEGLKHQAIAEQMGISVRTVERYIADALYHCYVLRYEDDC
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcaacgattccgtgcaaacgctctacagtgaccaccacggctggttgcatacc
tggctgcgtagcaagctcggcaacgcagccgatgcggctgacctcgcccaagataccttc
gtccgcttgctacagcgtcgtgaacaattgcagctgaatactcccagggccttcctacgc
acggtagcgcgtgggttggtgatcgatcattggcgccgcgaggaactgcacagggcctac
ctggaggctttggcccatgtgccggaagccctggccccctcagtcgagacccgcgagctg
ctgctggaattgcttgagcgtattgcacgcatgctcgacggcctcaaacccaaggtccgt
cgcgcattcctgctggctcaatgcgaggggctgaagcatcaggccatcgccgaacagatg
gggatctccgtgcgcaccgttgagcgctacatcgccgatgcgctctatcactgctacgtg
ctgcgctatgaagacgactgctga
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integrated database retrieval system
