Pseudomonas putida DOT-T1E: T1E_0226
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Entry
T1E_0226 CDS
T02181
Symbol
yjgR
Name
(GenBank) protein of unknown function DUF853, NPT
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppx03400
]
T1E_0226 (yjgR)
DNA repair and recombination proteins [BR:
ppx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
T1E_0226 (yjgR)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
CbiA
AAA_30
AAA_10
T2SSE
TrwB_AAD_bind
AAA_19
AAA_7
DUF2379
Hydrolase
AAA_6
SRP54
nSTAND3
nSTAND_NTPase5
EF-hand_7
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AFO46085
UniProt:
I7ATZ8
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All DBs
Position
263036..264511
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AA seq
491 aa
AA seq
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MSEFSTIVVGAGPDGQPVGQAMRLANRHGLVAGATGTGKTVTLQHLAEVFSDAGVAVFAA
DVKGDLCGLGAAGAPQGKVAERIAGMPWLGHTPKAYPVSLWDIAGLSGHPLRTTLSEMGP
LLLGNLLELTDSQQAALYAAFKVADREGLLLLDLKDLKALLAHLKDNPHLLGEDSALMTT
ASTQALLRRLATLEQQGAEALFGEPALQLEDLLRPDPDGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPVLALFFDEAHLLFNGTPKALQDRLEQVVRLIRSKGVG
VYFVTQSPGDLPDAVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPTFDTLAVLTEL
GIGEALVGTLEERGTPAIVQRVLVAPPQSRIGPLSAAERSALIAASPLAGRYDKPVDRES
AYEMLSQRKGEPVEPAPQAKADEESFADKAGEFLQSAAGQAIKSAVRQAANQLGRQLVRG
LMGSLLGGKKR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaattttcgaccatcgttgtaggcgcgggcccggatggccagccagtcgggcaa
gcaatgcgcctggccaaccgccacggtctggtggctggcgcaaccggtactggcaagacc
gtcaccctgcagcacctggcggaggtgttcagcgacgcgggggtagcggtgttcgccgcc
gatgtcaaaggcgacctctgtggcttgggggctgctggtgcgccacaaggcaaggtggct
gagcgcatcgccggcatgccgtggctggggcatacgcccaaggcctacccggtgagcttg
tgggatatcgccgggctgtcgggccacccgctgcgcaccaccctcagtgaaatggggccg
ctgctgctgggcaacttgctggaactgaccgacagccagcaggcggcgctgtatgcagca
tttaaggtggccgaccgcgaaggcctgctgctgctggacctcaaagacctcaaggccctg
ctggcgcatctgaaggacaacccgcatctgcttggcgaagacagcgcgctgatgaccacg
gcctccacccaggctttgttgcgccggctcgctaccttggagcagcagggcgccgaggca
ctgttcggcgagccggcattgcaactggaggacctgctgcgccctgatccggatggccgt
ggacgtatccacctgctagatgccagccgattggtgcacgaggcacccaaggtgtacgcg
acgttcctgttgtggttgctggccgaactgttcgagcagttgcccgagcgcggtgatgcc
gacaagccggtgctggcgctgttcttcgatgaagcacacttgctgttcaacggcacgccc
aaggcgctgcaggaccgtcttgagcaagtggtccggctgatccgctccaagggggtgggc
gtctatttcgttacccagtcgccgggtgacttgcctgacgcggtactggcccagttgggc
ttgcgcattcagcacggcttgcgggcgttcacggccaaggagcagaagtcgctgcgggcg
gtagccgatggtttccgtcccaacccaacattcgacaccctggcggtgcttaccgaactg
ggtattggcgaagcgctggtgggaacgttggaagaaaggggcacaccggccatcgtgcag
agggtgctggttgcaccgccgcagtcgcgtatcgggccactgagtgcggctgagcgcagt
gcgctgattgcggcgtcgccattggcggggcgctatgacaaaccggtggaccgtgagtca
gcctatgaaatgctgagccagcgtaagggcgagccggtggaaccggcgccgcaagcgaag
gcggatgaagagagttttgccgacaaggcgggtgagttcttgcagagtgcagcggggcag
gcgatcaagtcagcagtgcgccaggccgctaaccagttggggcggcagttggtgcgcggg
ttgatggggtcgttgttagggggcaagaaaaggtag
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