Pseudomonas putida DOT-T1E: T1E_0412
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Entry
T1E_0412 CDS
T02181
Name
(GenBank) hypothetical protein
KO
K11900
type VI secretion system protein ImpC
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
T1E_0412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppx02044
]
T1E_0412
Secretion system [BR:
ppx02044
]
Type VI secretion system
Imp/Vas secretion system core components
T1E_0412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
AFO46271
UniProt:
I7BZL4
LinkDB
All DBs
Position
468611..470101
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AA seq
496 aa
AA seq
DB search
MPKPSSTAITTDATADTLSNATLLDQIMAETKLVPAQEGYQIARQGVSAFITEILKSNDP
DQLINKHRADQMIAEIDRMLGNQMDAILHQPEFQQLESSWRSLKLLVDRTDFRENIKLEV
LHVTKEDLLDDFENAADITCSGIYKHVYTAGYGQFGGEPVAAMVGNYNFGPSSPDIKLLS
YMASVGAMSHAPFLAAPAPEFFNLNSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHV
ALTGPRFMLRSAYHPQEQPIESFNYNEGIAGQHDNYLWGNSAFLLASCINDSFARYRWCP
NIIGPQSGGAVEDLPVHLYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNA
AFFSANSVQKPKHFPKTPEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKER
RDLESELNKWIKQYVADQENPSADVRSRRPLRAARIEVSDVAGDPGWYQVSLAVRPHFKY
MGANFEISLVGRLDTQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagccaagcagcaccgccatcaccacagacgcaacggccgacacattgagcaat
gccaccctgctcgaccagatcatggcagaaaccaaactggtacctgcccaggagggctac
cagattgccaggcagggcgtatctgccttcatcaccgaaatactcaaaagcaatgaccca
gatcaactgatcaacaagcaccgagccgaccagatgattgccgagatcgaccgaatgctc
ggcaatcagatggatgccattctgcatcagcctgagttccagcagcttgaatcatcatgg
cgcagccttaaacttctggtcgaccgcacggacttcagggagaacatcaagcttgaagtc
ttgcatgtcacgaaagaggacctgctcgacgacttcgaaaatgctgctgacattacctgc
agcggtatctacaagcatgtttacaccgcgggttatggccaattcgggggagagccggtt
gcggccatggtaggcaactacaacttcggcccctcttcccctgacatcaagttgctaagt
tacatggcctccgttggcgccatgtcccatgccccttttcttgctgcacctgcccccgaa
tttttcaatttgaacagcttcgaggagctgcctaacctcaaggaaataaaagacctcttc
gccggccctcggcatgccaagtggcgcgcttttcgtgaaagcgaagacgcccgccacgtc
gccctgaccgggccgcgcttcatgcttcgctccgcttaccacccgcaggaacaaccgatc
gagagcttcaactacaacgaaggcatcgccgggcagcacgacaactacctgtggggcaat
tctgcttttctgttagccagttgcatcaacgacagcttcgcccgctaccgctggtgcccg
aatatcatcggcccccaatccggcggtgctgtcgaagacttgccggtccacctgtacgaa
tccctgggccagttgcaggccaagattcctaccgaggtgctgatatccgaccgcaaggaa
ttcgaactggccgaagagggcttcatcgccctgaccatgcgcaaagacagcgacaacgcc
gcgttcttctccgccaactcggtacaaaagcccaagcacttcccaaaaacccctgagggg
cttcaggcacagaccaactacaagctgggtacccagttgccctacctgttcatcgtcaac
cggctcgcccactacatcaaggtgctgcagcgcgagcagatcggcagttggaaagagcgc
cgtgaccttgagtccgagctgaacaaatggatcaagcagtacgtcgccgaccaggagaac
ccgtctgccgacgttcgcagccgccggccgctgcgtgccgcccgtattgaggtctcggat
gttgcgggtgacccgggctggtaccaggtttcgctcgccgtacgtccgcacttcaagtac
atgggcgcgaacttcgagatttccctggtcgggcggctcgatacgcaatga
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