Pseudomonas putida DOT-T1E: T1E_0418
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Entry
T1E_0418 CDS
T02181
Name
(GenBank) hypothetical protein
KO
K11893
type VI secretion system protein ImpJ
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
T1E_0418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppx02044
]
T1E_0418
Secretion system [BR:
ppx02044
]
Type VI secretion system
Imp/Vas secretion system core components
T1E_0418
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AFO46277
UniProt:
I7BQ94
LinkDB
All DBs
Position
474674..476011
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AA seq
445 aa
AA seq
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MSSRNPVLWPEGLFVKPQHFQQATRASEAALHQRLASLNAAFYGFSELQLSDEYLSLGKV
AITRARGVMPDGTVFDIPADLPPPPPLEIGDDACKDSEVYLCLPLRTDGGREVSWPDNAA
NFRYTAQAQEIKDTHTADGDLVQVDLAVPNLQLKRKTEDSSAYTRLALARILERRPDGSL
QLDEAFYPTSVSVRAVPALQRFLEEITHTLRERARGLATRIGASGQSGIADIRDFNLLQA
MNRWWPCFQHLARQAQTHPEQLYLCMSQACGEFVTFTDQNRLPQEYPAYHHTALRTSFKP
LEDTLRRSLSTVLRPRAVSLPLESEQFGVMTTTLEDRRLIDEADFILAVRASMPPQALRQ
MFIQKAKITSLESLNDLVPLQLPGIPLLPLPVAPRDLPFHAGFSYFELDRRDPAWACMSK
ANGFGIHIAGDFPGLELQFWAIRSE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgcaatcccgttctctggcccgaaggcctgttcgtcaaaccacagcatttc
cagcaggcgaccagggccagcgaagcagccctgcaccagcgcctcgccagcctcaacgca
gccttctacggcttcagcgaacttcagttgagcgacgaatacctgagcctgggcaaagtc
gccatcacccgggcgcgcggtgtgatgccggacggcacggtgttcgacattcccgccgac
ctgccgccaccgccgccgctggaaatcggcgacgacgcgtgcaaagacagtgaggtgtat
ctgtgcctgccgctgcgtaccgatggcggccgcgaagtgagctggcccgacaatgcagcc
aatttccgctataccgcccaggcacaggaaatcaaggatacccacaccgctgacggtgac
ctggtgcaggtagaccttgcggtgcccaacctgcagctcaaacgcaagaccgaagacagc
agcgcctacacccgcctggccctggcacgtattctggaacggcgccccgacggcagcctg
caactggacgaagcgttctaccccaccagcgtttcggtgcgggcggtgccagcgctgcag
cggtttcttgaagaaatcacccataccttgcgcgagcgggcgcgcggcctcgccacgcgg
attggtgcctcgggccagtccgggatcgccgacattcgcgacttcaacctgctgcaggcc
atgaaccgttggtggccatgcttccagcatctggccaggcaagcgcaaacgcaccccgag
cagctgtacctgtgcatgagccaggcctgcggcgaattcgtcaccttcaccgaccagaac
aggctgccgcaggagtaccccgcctatcaccacaccgcgctgcgcacctctttcaaacca
ctggaagacaccttgcgtcggtctctgagcaccgtcttgcggccacgcgctgtttcacta
ccgctggagagcgaacaattcggcgtgatgacgaccacgctggaagaccgccggctgatc
gacgaagccgacttcatcctcgccgtgcgcgccagcatgccaccacaggcgttgcgccag
atgttcatccagaaagccaagatcacctcgcttgagtcactgaatgacctggtgccgctg
caattgccgggcatccctttgttgccattacccgtggcgccccgcgacctgcccttccat
gcgggcttcagctacttcgagctggaccgacgagacccggcctgggcgtgcatgagcaag
gcgaatggcttcggcatccacattgcgggcgacttcccagggcttgaactgcagttctgg
gcgatcaggagtgagtga
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