Pseudomonas putida DOT-T1E: T1E_0538
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Entry
T1E_0538 CDS
T02181
Name
(GenBank) Isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00020
Citrate cycle (TCA cycle)
ppx00480
Glutathione metabolism
ppx00720
Other carbon fixation pathways
ppx01100
Metabolic pathways
ppx01110
Biosynthesis of secondary metabolites
ppx01120
Microbial metabolism in diverse environments
ppx01200
Carbon metabolism
ppx01210
2-Oxocarboxylic acid metabolism
ppx01230
Biosynthesis of amino acids
ppx04146
Peroxisome
Module
ppx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppx_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
T1E_0538
09102 Energy metabolism
00720 Other carbon fixation pathways
T1E_0538
09106 Metabolism of other amino acids
00480 Glutathione metabolism
T1E_0538
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
T1E_0538
Enzymes [BR:
ppx01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
T1E_0538
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
AFO46396
UniProt:
I7C000
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All DBs
Position
609498..611723
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AA seq
741 aa
AA seq
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MPTRSKIIYTFTDEAPALATYSLLPIIEAFTASADIAVETRDISLAGRILAAFPEQLGAE
KQVGDHLAELGQLATTPEANIIKLPNISASVPQLKAAIKELQGKGFNIPDYADEPATAEE
KESRARYDRIKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAADSKSHVAHMTQG
DFYGSEKAALIEADDSLRIELVGKDGSTTVLKEKTAVKAAEVIDCATMSRKALKAFIAEQ
IADAKAAGVLLSVHLKATMMKVSDPIMFGVIVEEFYNDVLTKHAAALAEVGFNANNGIGD
LYARIKDLPADKQAEIEADIQALYAERPALAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGKMWNTAGELQDAKAVIPDRCYAGIYQATIEDCKVNGAFDPTTMGSVPNVGLMAQKAEE
YGSHDKTFQVKADGVVRVVDGKGNVVLEQNVEAGDIFRMCQTKDAPIQDWVKLAVNRARL
SNTPAVFWLDPARAHDGVMIEKVQKYLKDHDTTGLDIRILAPVDAIKFSLARIREGKDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFL
RWDSLGEFLALAASLEHLGNTYDNPRAKVLANTLDQATGKFLDTNKSPSRKVGGIDNRGS
HFYLTLYWAEALAAQTDDAALQARFAPLAKTLAENEATIVAELNAVQGKPADIGGYYAPD
AELTAKVMRPSQTLNSAIAAL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccgttccaagatcatctataccttcaccgacgaagcccccgccctcgccact
tactcgctgctgccgatcatcgaagcgttcaccgcttcggctgacatcgctgtcgaaact
cgcgacatctccctggctggccgtatccttgccgccttcccggagcaactgggcgcagag
aagcaagtaggcgatcacctggcggaactgggccagctggctaccacccctgaagccaac
atcatcaagctgccgaacatcagcgcctcggtaccgcagctcaaagccgcgatcaaggaa
ctgcaaggcaagggcttcaacatccctgactacgccgacgagccggccaccgcggaagaa
aaagaatcccgtgcccgctacgaccgcatcaaaggttccgccgtgaacccggtgctgcgc
gaaggcaactccgaccgccgcgcgccgctgtcggtcaagaactacgcccgcaagcaccca
cacaagatgggtgcctgggccgccgactccaagtcgcacgttgcccacatgactcaaggc
gacttctacggcagcgaaaaggccgcgctgatcgaagctgacgacagcctgcgcatcgag
ctggtcggcaaagacggcagcaccaccgtgctgaaagaaaaaaccgccgtcaaagccgct
gaagtcatcgactgcgccaccatgagccgcaaggccctgaaagccttcatcgccgagcag
atcgccgatgccaaggccgccggcgtgctgctgtcggtgcacctgaaagccaccatgatg
aaggtctccgacccgatcatgttcggcgtcatcgtcgaagagttctacaacgacgtgctg
accaagcacgccgctgccctggccgaagtaggcttcaacgccaacaacggtatcggcgac
ctgtacgcccgcatcaaggacctgccagctgacaagcaggccgagatcgaagccgacatc
caggccctgtacgccgagcgcccggccctggccatggtcaactccgacaaaggcatcacc
aacctgcacgtgccgagcgacgtgatcgtcgacgcctcgatgccggccatgatccgtgac
tcgggcaagatgtggaacaccgcaggcgaactgcaagacgccaaggccgtgatcccggac
cgctgctacgccggcatctaccaggccaccatcgaagactgcaaggtcaacggtgccttc
gacccgaccaccatgggcagcgtgccgaacgttggcctgatggcccaaaaggccgaagag
tatggctcccacgacaagaccttccaggtcaaggctgacggcgtggttcgtgtagtcgat
ggcaagggcaacgtggtgctggagcagaacgtcgaagccggtgacatcttccgtatgtgc
cagaccaaagacgcgccgatccaggactgggtcaagctggccgtcaaccgtgcccgcctg
agcaacaccccggcggtgttctggctggacccggctcgcgcccacgacggcgtcatgatc
gagaaggtgcagaagtacctgaaagatcacgacaccaccggcctggacatccgcatcctg
gcaccggtcgacgccatcaagttctccctggcccgcatccgcgaaggcaaggacaccatc
tcggtgaccggcaacgtgctgcgtgactacctgaccgacctgttcccgatcatggagctg
ggcaccagcgccaagatgctgtcgatcgtgccgctgatgaacggcggtggcctgttcgaa
accggcgccggcggttcggctccgaagcacgtgcaacagctggttgaagagaacttcctg
cgttgggattcgctgggtgaattcctggccctggccgcttccctggagcacctgggcaac
acctacgacaacccgcgcgccaaggttctggccaacaccctggaccaggctaccggcaag
ttcctcgacaccaacaagtcgccgtcgcgcaaagtcggcggtatcgacaaccgcggcagc
cacttctacctgaccctgtactgggccgaagccctggccgctcagacggacgacgctgcc
ctgcaggcacgtttcgcaccactggcaaaaaccctggccgagaacgaagcgaccatcgtc
gccgagctcaacgccgttcagggcaagccagccgacatcggcggctactacgccccggat
gccgagttgaccgccaaggtgatgcgcccaagccagaccctgaacagcgccatcgctgcc
ctgtaa
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