Pseudomonas putida DOT-T1E: T1E_0636
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Entry
T1E_0636 CDS
T02181
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppx03016
]
T1E_0636
Enzymes [BR:
ppx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
T1E_0636
Transfer RNA biogenesis [BR:
ppx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
T1E_0636
Prokaryotic type
T1E_0636
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
AFO46494
UniProt:
I7C4D0
LinkDB
All DBs
Position
complement(718780..719697)
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETVMQMGQTTNTGDAEGEVLQTRDVTVGRADIEALLPRFRGPIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTINRLELLECEGTRARLSVGCSKGTYI
RTLVEDIGEALGCGAYVAELRRTQAGPFALAQTVTLEELEQAHAEGGNEALDRFLMPSDS
GLQDWPLVSLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNARFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtatccgccgcaatgtcagcggcatcatcctgctcgataagccg
ctgggcttcacgtccaatgccgccttgcagaaagtgcgttggctgctgaacgcggaaaag
gccggccataccggtagcctcgacccgctggcgaccggcgtgttgccgctgtgcttcggt
gaagcgaccaagttttcgcagtacttgctggattccgacaagggctacgaaaccgtcatg
cagatggggcagactaccaacaccggcgatgccgagggtgaggtgctgcagacccgcgac
gtgaccgttggtcgcgccgacatcgaagcactgctgccacgttttcgcggcccgatcagc
cagataccgcctatgtactcggcgctcaagcgtgacggccagccgttgtacaagctggca
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattaaccgcttggagttg
ctcgagtgcgaaggcacccgtgcacggttgagcgtaggatgcagcaaaggcacctatatc
cgcacgctggtggaggatatcggtgaagcccttggttgcggcgcctatgtcgccgagctg
cgcaggacccaggcagggccctttgcgttggcacagacggtcaccctcgaggaactcgaa
caggcccatgccgaaggtggcaacgaagcgctcgaccgcttcctgatgccatcggacagc
gggctgcaggactggccgttggtcagcctgtcggaacacagtgcgttctactggctgcat
ggccaggcggtacgcgcgccggacgcgccacaatttggcatggtgcgggtacaggatcac
aacgcacgcttcatcggtatcggtgaagtgagcgaagacgggcgcattgcgccgcgtcgg
ctgattcggtcggaatga
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