Pseudomonas putida DOT-T1E: T1E_0846
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Entry
T1E_0846 CDS
T02181
Symbol
yfiN
Name
(GenBank) diguanylate cyclase
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
T1E_0846 (yfiN)
Enzymes [BR:
ppx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
T1E_0846 (yfiN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
SMP_2
HAMP_PhoQ
Motif
Other DBs
NCBI-ProteinID:
AFO46704
UniProt:
I7C4V8
LinkDB
All DBs
Position
complement(956047..957318)
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AA seq
423 aa
AA seq
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MKPTRKRTVRPTLRSVLGRGHLSVALLAVGLAGISLTLLGVLALRVYANHNLQLIARSIS
YTVEAAVVFDDSAAANESLALIASTEEVAEAKVFNNEGEQLAHWQRDNTGMLAQLEVQVA
STLLDEPVILPIVHQQQQVGHIELAGQGRSLLLFLLSGLAGILFCTVLSALAAQYLSRRL
LSDITRPLRGLASVAHAARRERSFDRRVPEAPIAELNELGNDFNALLDELEVWHSHLQSE
NQTLAHQASHDSLTGLPNRAFFEGRLSRSVRNAARQQDHLALLFLDSDHFKQINDTLGHA
VGDEVLISVAERVRAQLREHDLVARLGGDEFAVLLTPLHTRKDAEHIAEKIVASMKLPVQ
LDSGRSISTSLSVGIAYYPDDGADPASLLNAADAAMYQAKRERRGHWQLAQTERSANEIR
NRS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgacccgcaagcgtaccgtgcgcccgaccctgcgctcggtgctgggccgtggt
caccttagcgtcgccttgcttgccgttggcctggcgggtatctccctcaccctgctgggc
gtgctcgccctgcgtgtctatgccaaccataacctgcagttgatcgcccgctcgatcagt
tacacggtagaggcggcggtggtgttcgatgacagcgccgccgccaatgaatcgctggcg
ttgattgccagtaccgaagaagtggccgaggccaaggtcttcaacaacgagggcgagcaa
ctggcgcactggcaacgcgacaataccggcatgctcgcgcagctggaggtgcaggttgcc
agcaccttgctggatgagccggtcattctgccgatcgtgcaccagcaacagcaggtcggg
catatcgaactggcaggccagggcaggagcctgttgctgttcctgctcagtggcttggcc
ggtatcctgttctgcacggtcctcagcgccctggctgcccagtatctgtcgcggcgcctg
ctcagcgatatcacccgcccgctgcgtggcctggccagtgtcgcccatgccgcccgccgc
gagcgcagcttcgaccggcgcgtaccagaagcgccgattgccgagctgaacgagctgggt
aatgacttcaatgccctgctggatgaactggaggtgtggcatagccacctgcagagcgaa
aaccagacccttgcccatcaggccagccacgacagcctgaccggcttgcccaaccgcgcc
ttctttgaagggcgcctgagccgcagcgtgcggaatgcggcgcgtcagcaggaccacctg
gcactgctgttcctcgacagcgaccacttcaagcagatcaacgacaccctcggccacgcc
gtgggtgacgaggtgttgatcagcgtggccgaacgtgtgcgcgcccaactgcgcgagcac
gatctggtggcgcgcctggggggcgacgagtttgccgtgctgttgacgccgttgcatacg
cgcaaggacgccgaacacattgccgagaagatcgttgccagcatgaagctgccggtgcaa
ctggacagtggccgcagtatctccacctcgctgagtgtcggtattgcctattacccggat
gacggcgctgaccccgccagtcttctcaatgccgccgatgcggcaatgtaccaggccaag
cgcgaacgccgtggccattggcaactggcgcagacggaacggtccgccaacgaaatcagg
aacaggagttga
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