Pseudomonas putida DOT-T1E: T1E_0896
Help
Entry
T1E_0896 CDS
T02181
Name
(GenBank) Putative ribosome maturation factor rimN
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppx03009
]
T1E_0896
03016 Transfer RNA biogenesis [BR:
ppx03016
]
T1E_0896
Enzymes [BR:
ppx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
T1E_0896
Ribosome biogenesis [BR:
ppx03009
]
Prokaryotic type
Other maturation factors
T1E_0896
Transfer RNA biogenesis [BR:
ppx03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
T1E_0896
Prokaryotic type
T1E_0896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Amanitin
Motif
Other DBs
NCBI-ProteinID:
AFO46754
UniProt:
I7C505
LinkDB
All DBs
Position
1019926..1020483
Genome browser
AA seq
185 aa
AA seq
DB search
MVSSFRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEDAVYRLLALKSRPVDKGLILIAD
NIRQFDFLFEDFPEDWIDRMSSTWPGPNTWLVPHQDLLPEWVTGQHDTVALRVSDHPVVR
ELCALVGPLISTSCNPGGRPAAKTRLRVEQYFHGQLDLVLGGALGGRKNPSVIRNLATGE
VVRPG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcagttttcgtgtgcaacaagccgcacgtgagatccgggcgggcgcggtgatc
gcctacccgacggaagcggtctggggcctgggctgcgacccatggaacgaggacgcggtg
tatcgcctgctggcgctgaagtcgcgtcctgtggataaagggctgattctgatcgctgac
aatatccgtcagttcgacttcctgttcgaggacttccccgaggactggatcgaccgcatg
agcagcacctggccggggccgaacacctggctggtgccgcaccaggacctgttgcccgaa
tgggtgaccgggcagcatgacacggtagcgctgcgggtcagtgatcacccggtggtgcgt
gagttgtgcgcgctggtggggccgctgatttccacctcgtgcaaccctggcgggcgcccg
gcggcgaagacccgcttgcgggttgagcagtacttccatggccagttggacctggtgctg
ggtggggcgctgggcgggcggaagaacccgagtgtgattcgcaacctggcaaccggcgaa
gtcgttcgcccgggttga
DBGET
integrated database retrieval system
