Pseudomonas putida DOT-T1E: T1E_1622
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Entry
T1E_1622 CDS
T02181
Name
(GenBank) Fis family GAF modulated sigma54 specific
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppx03000
]
T1E_1622
Transcription factors [BR:
ppx03000
]
Prokaryotic type
Helix-turn-helix
Other families
T1E_1622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
PAS_4
AAA_5
PAS_9
HTH_30
PAS
AAA_2
HTH_1
HTH_28
HTH_7
AAA
HTH_29
HTH_22
HTH_23
HTH_20
HTH_11
AAA_16
AAA_7
HTH_17
AAA_22
PAS_8
Diguanyl_cycl_sensor
HTH_50
Mga
Motif
Other DBs
NCBI-ProteinID:
AFO47476
UniProt:
I7C350
LinkDB
All DBs
Position
complement(1782011..1783921)
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AA seq
636 aa
AA seq
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MARQLITNAHDPLHESREARLKLASEGELPLGMLRDEIDASWRRSLGHGLDCLQGEQVGL
GLEQGHDLRLLLERNRLLIDAVTPELDYLVARQGKAGIVILGDAQANVLAIEGQKHVLQR
EGLRDLHPGSCWSESLRGTNAIGTAVVEGRPTLINCGEHYLDRLSPFSCTSVPLRDPRGE
VIGVLDITREGVMAQPQDSLSTLMLAAGNIESRLFGLCHPDQLVLAFHSRPQYLNSAWHG
LLALSLDGEVLAANDSACQLLQVPRHELIGRRSTDLLGERSPAFIARLWQGGVSSVQTAK
GEFYFRALQLPRHGRVSPSTPPGKPALSKQSPALDALAGGDQRLARNLRMARQGLGNGLP
VLLLGETGTGKEVVARALHQASPRADKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRG
GMVGRLMQAHGGTLFLDEIGDMPLALQARLLRVLQERRVAPLGAGDEQDIDVALICATHR
DLKRLVQEQHFREDLFYRVNGVSLRLPALRERDDLAAIIQGLLDKADARGVTLDPALTAL
LEGFDWPGNIRQLEMVVRTALAMREDGEQVLTLDHLTDCLLDELASSAAPSGSLKDSELE
QIRGALARHQGNVSAAAEALGISRATLYRKLKQLRG
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgacaacttataacaaacgcccacgacccgctgcacgaatcccgcgaggcccgg
ttgaagctggccagcgaaggcgaactaccgctgggcatgctgcgcgacgagatcgacgcc
tcctggcgccgcagcctgggccacggcctggactgcctgcagggcgagcaggtcggcctg
ggcctggaacagggccatgacctgcgcctgctgctggagcgcaaccgcctgctgatcgat
gccgttacccccgaactcgactacctggtcgcgcgccagggcaaggctggcatcgtcatc
ctcggcgatgcccaggccaacgtgctggccatcgaaggccagaagcacgtgctgcaacgc
gaaggcctgcgcgatctgcatccgggcagttgctggagcgaatcgctgcgcggcaccaat
gccatcggcacggccgtggtcgaaggccggccgacgctgatcaactgcggcgaacattac
cttgaccgcctgagcccgttctcctgtacttccgtgccactgcgcgacccgcggggcgag
gtgatcggcgtgctcgacatcacccgcgaaggggtgatggcgcaaccgcaggacagcctg
tcgaccctgatgctggctgccggcaacattgaaagccgcctgtttggcctgtgccacccg
gaccagttggtgctggccttccacagccgcccgcagtacctcaacagtgcctggcacggc
ctgctggccctgagcctggacggcgaagtgctggctgccaacgacagtgcctgccagctg
ttgcaggtgccgcgtcacgaactgattgggcggcgtagcaccgacctgcttggcgaacgt
tccccggcctttatcgctcgcctgtggcagggcggggtgagcagcgtgcagaccgccaag
ggcgagttctatttccgtgccctacagctgccgcgccatggccgggtcagccccagcaca
ccacctggcaagccggccttgagcaaacagtcgcctgcactcgatgctctggccggaggt
gatcaacgcctggcgcgcaacctgcgcatggctcgccaggggcttggcaatggtttgcca
gtgttgctgctgggcgaaaccggtaccggcaaggaagtggtcgctcgggccttgcaccag
gccagcccgcgtgccgacaaaccgtttgtggcagtcaactgcgcggccattcccgaaggg
ctcatcgagtccgagctgttcggctatcgcgagggcgccttcaccggttcgcgccggggt
ggcatggtcgggcggctgatgcaggcccatggcggcacgctgttcctcgacgaaatcggc
gacatgccgctggccctgcaagcacgcctgctgcgggtgctgcaggagcgccgcgtagca
cccttgggggcgggcgacgagcaggacatcgacgtggcgctgatctgcgccacccaccgc
gacctcaagcgcctggtgcaggaacaacacttccgtgaagacctgttctaccgggtcaac
ggcgtgtcgctgcgcctgccggccctgcgcgaacgtgatgacctggcggcgatcatccag
ggcctgctggacaaggctgatgcgcgtggcgtaaccctcgacccggcgttgaccgcgttg
ctcgaaggcttcgactggcctggcaacatccgccagctggaaatggtggtgcgcaccgcc
ctggccatgcgcgaggatggggagcaggtgctgacactcgatcaccttaccgactgcctg
ctggacgaactcgccagcagcgcagcgccctccggcagcctcaaagacagtgaactggaa
cagatccgcggtgctctggcgcgccaccagggcaacgtctcggccgccgccgaggcactg
ggtatcagccgggcgacgctgtaccgcaagctcaagcagttgcgcggctga
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