Pseudomonas putida DOT-T1E: T1E_1675
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Entry
T1E_1675 CDS
T02181
Symbol
atoC
Name
(GenBank) sigma-54 dependent transcription regulator
Organism
ppx
Pseudomonas putida DOT-T1E
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
VpsR
AAA_5
HTH_8
AAA_16
HTH_29
HTH_17
AAA_2
Mg_chelatase
HTH_23
AAA
AAA_3
HTH_50
AAA_7
AAA_22
HTH_28
nSTAND6
HTH_22
ATPase
Motif
Other DBs
NCBI-ProteinID:
AFO47529
UniProt:
I7C770
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Position
1834894..1836219
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AA seq
441 aa
AA seq
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MQQPAAQRRLLIVDPCDDCHRLLPGLRNAGWDVDSCMLGAALDHTCDVGLLRLQASHLRH
PDAVKDMIKRSNTEWIAVLSADQLRMPALGDFVCEWFFDFHTLPFDVSRVQVTLGRAFGM
ARLRGKGAIKVDEATHELLGESRPIRELRKLLGKLAPTESPVLIRGESGTGKELVARTLH
RQSQRSEQPFIAINCGAIPEHLIQSELFGHEKGAFTGAHQRKTGRIEAADGGTLFLDEIG
DLPLELQANLLRFLQEKHIERVGGSQPIPVDVRVLAATHVDLERAIEQGRFREDLYYRLN
VLQVVTAPLRDRHGDLSMLANHFAHFYSVETGRRPRSFSDHALAAMGRHDWPGNVRELAN
RVRRGLVLAEGRQIEAQDLGLQLLDPEQQPLGTLEEYKQRAERQALCDVLNRHSDNLSVA
AKVLGISRPTFYRLLHKHQIR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcctgccgctcaacgccgtttgcttatcgtcgacccctgcgacgattgccac
cgcttgttacctggcctgcgcaacgcaggctgggatgtggacagctgtatgctcggggct
gcgctggaccacacgtgcgatgtcgggctattgcgcttgcaggcttcgcacctgaggcac
ccggacgcggtcaaggacatgatcaagcgcagcaacaccgaatggattgccgtgctcagc
gccgatcagttgcgcatgccggcgctcggtgattttgtgtgtgagtggtttttcgacttc
cataccctgccgttcgacgtctcccgcgtgcaggtaaccctgggccgggccttcggcatg
gcgcgcttgcgcggcaagggggccatcaaggtcgatgaggcaacccatgagttgctcggc
gaaagccgacctatccgcgagttgcgcaagttgctgggtaaactggcacccaccgaatcg
cctgtgctgatccgcggggagagcggcaccggcaaagagctggtggcgcgcaccttgcac
cgtcagtcgcaacgcagcgagcagccgttcatcgcgatcaactgcggggcgatccccgag
cacttgatccagtccgaactgttcggccatgagaagggcgcctttaccggtgcccaccag
cgcaagaccgggcgtatcgaagcggccgatggcggcacattgtttcttgatgaaatcggc
gacctgccgttggaattgcaggccaacttgctgcgttttttgcaggagaagcacatcgag
cgcgtgggtggcagccagcccataccggtggatgtacgggtgctggcggccacccatgtg
gaccttgagcgggccattgagcaagggcgtttccgcgaagacctgtattaccgcctgaac
gtattgcaggtggtgaccgcgccgttgcgcgaccggcatggtgacctgtcgatgctggcc
aaccattttgcccatttctacagtgtggagaccgggcgtcggccacggtcgttcagcgac
catgccctggcggcgatggggcggcatgactggccgggcaatgtgcgcgaactggccaac
cgcgtgcgccgcgggttggtgctggccgaagggcggcagatcgaggcgcaggacctgggg
ttgcaactgctcgacccggaacaacagccgctgggcacgctggaagagtacaagcagcgc
gccgagcgccaggcgctgtgcgatgtgctcaaccggcacagcgacaacctgagcgtggcg
gccaaggtgctgggcatttcacggccgacgttctatcggttgttgcacaagcaccagata
cgctga
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