Pseudomonas putida DOT-T1E: T1E_1807
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Entry
T1E_1807 CDS
T02181
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppx03009
]
T1E_1807
Ribosome biogenesis [BR:
ppx03009
]
Prokaryotic type
ribosomal protein modification factors
T1E_1807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Sin3a_C
Motif
Other DBs
NCBI-ProteinID:
AFO47655
UniProt:
I7AY66
LinkDB
All DBs
Position
1977187..1979373
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AA seq
728 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRDIPTENIRLSQNNIVDPENRYNQIFKIQVELPEDISDKDRQGILRSIDRCTVKKVVQT
GPEFVIEVVDNLDADAQGLLMPVSDTSTYIPGKDLPLEQTIANMSGILAGLGMKIEIASW
RNIVPNVWSLHVRDAQSPMCFTNGKGATKEAALASALGEFIERLNCNFFYNDQFWGEDLA
NAPFVHYPNEQWFKPGPRDALPAEILDEHCLAIYNPDGELRGSHLYDTNSGNTARGICSL
PFVRQSDQQVVYFPSNLIENLFLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGELCL
PDVPQEVLAKYPAIVAGIQGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASFGA
HPSLEVALERSLTELLQGRSFEGLNDLPQPTFESHALTEPNNFVEHFIDSSGVVSWRFFS
AKADFEFVEWDFSGHGEDSNQQEAATLFGILEDLGKEVYMAVYDNLGATACRILVPGYSE
IYPVEDLIWDNTNRALSFRADILNLHSLDSRSLKLLLKRLDNCDVDDYTTITTLIGVEFD
ENTVWGQLTILELKLLICLAVQRFEDAKELVEAFLQFNDNTVDRGLFYQALNVVLEVQLD
DELEMDDYEANFRRMFGNARMDAVLGSVDGSVRFHGLTPTSMKLEGLDRHLRLIDSYKKL
HAARAKFA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaattttctcgacaatctccgtctcgaagccaaattcgatgacttc
acggtgatcgccgaccaacctatccgctacaaaggcgatggttcggcccccggcccgttc
gactatttcctggcgtcttcggccttgtgcgcggcttacttcgtcaagctgtactgccag
acccgcgatatccccaccgaaaatatccgcctgtcgcagaacaacatcgtcgacccggaa
aaccgctacaaccagatcttcaagatccaggtcgaactgcccgaagacatctccgacaag
gaccgtcaaggcatcctgcgctccatcgaccgctgcacggtaaaaaaggtggtgcagacc
ggccctgagttcgtgatcgaggtggtcgacaacctcgatgccgatgcccaggggctgctg
atgccggtgtcggacaccagcacctatatccccggcaaggacctgccgctggagcagacc
attgccaacatgtcgggcatcctcgccgggctggggatgaagatcgagatcgcctcgtgg
cgcaacattgtccccaacgtctggtcgctgcacgtacgcgatgcgcagtcacccatgtgc
tttaccaacggtaaaggcgccaccaaggaggctgcgctggcctcggcgctgggcgagttc
atcgagcgcctcaactgcaacttcttctacaacgaccagttctggggcgaagacctggcc
aacgccccgttcgtgcactacccgaacgagcagtggttcaagccgggcccgcgcgacgcg
ttgccggccgagatcctcgatgagcactgcctggcgatctacaaccctgacggggagctg
cgtggttcgcacctgtatgacaccaactcgggtaacacggcgcggggcatctgttcgctg
ccgttcgtgcgccagtccgaccagcaggtggtgtacttcccgtccaacctgatcgaaaac
ctgttcctcagcaatggcatgagcgcgggcaacaccttggccgaggcgcaggtgcagtgc
ctgtcggaaatcttcgagcgggcagtgaagcgcgaaatcctcgagggcgagttgtgcctg
ccggacgtgccgcaagaggtgctggccaaatacccggcgatcgtcgccggcatccagggc
ctggaagagcagggcttcccggtgctggtcaaggatgcgtcgctggggggcgagttcccg
gtcatgtgcgtgaccttgatgaacccgcgcacgggtggcgtgtttgcctcgttcggtgcc
cacccgagcctggaagtggcgctggagcgcagcctcaccgagctgctgcagggccgcagc
ttcgaaggcctgaacgacctgccgcaacccaccttcgaaagccatgcactgactgagccg
aacaacttcgtcgagcatttcatcgactccagcggcgtggtgtcgtggcgcttcttcagc
gccaaggccgacttcgaattcgtcgagtgggacttctccgggcacggcgaggactccaac
cagcaggaggccgcgaccctgttcggcatcctcgaagacctgggcaaggaagtgtacatg
gcggtatacgacaaccttggcgccaccgcgtgccgcatactggtgccgggctattcggaa
atctacccggtcgaggacctgatctgggacaacaccaaccgcgccttgtcgttccgtgca
gacatcctcaacctgcacagcctcgacagccgctcgctcaagctgctgctcaagcgcctg
gacaattgcgatgtggatgactacaccaccatcaccacgctgatcggcgtggagttcgat
gaaaacacagtgtggggccaactgaccattctggagctgaagctgctgatttgcctggcg
gtacagcgttttgaggacgccaaggaactggttgaggcattcttgcagttcaacgacaac
accgtagaccgcggcctgttctaccaggcgctgaacgtggtgctggaagtgcagttggat
gacgaactggagatggatgactacgaagccaacttccgccgtatgttcggcaatgcgcgc
atggacgcggtattgggttcggtggacggcagtgtgcgcttccatggcctgaccccgacc
agcatgaagctcgaaggccttgatcgccacctgcgcctgatcgacagctacaagaaactg
cacgcggcccgggccaagttcgcctga
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