Pseudomonas putida DOT-T1E: T1E_2030
Help
Entry
T1E_2030 CDS
T02181
Symbol
ydcP
Name
(GenBank) putative protease ydcP
KO
K24847
23S rRNA 5-hydroxycytidine C2501 synthase
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppx01002
]
T1E_2030 (ydcP)
Peptidases and inhibitors [BR:
ppx01002
]
Peptidases of unknown catalytic type
Family U32
T1E_2030 (ydcP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_U32
DUF3656
Motif
Other DBs
NCBI-ProteinID:
AFO47878
UniProt:
I7B908
LinkDB
All DBs
Position
2222927..2224927
Genome browser
AA seq
666 aa
AA seq
DB search
MSLPKNHLELLSPARDVAIAREAILHGADAIYIGGPSFGARHNACNEVSDIAELVEFAHR
YHARVFTTINTILHDNELEPARKLIHQLYDAGVDALIVQDLGVMELDIPPIELHASTQTD
IRTLERAKFLDQAGFSQLVLARELNLQQIRAIAAETDAAIEFFIHGALCVAFSGQCNISH
AQTGRSANRGDCSQACRLPYTLKDDQGRVVAFEKHLLSMKDNNQTANLADLVDAGVRSFK
IEGRYKDMGYVKNITAHYRKELDAILEDRPQYARASSGRTEHFFLPDPDKTFHRGSTDYF
VTDRKVDIGAFDSPTFTGLPVGVVEKVGKRDMQVVTDVPLTNGDGLNVLVKREVVGFRAN
IAEPRGEFEEDGQKRYRYRVEPNEMPEGLHKLRPNHPLSRNLDHNWQQALQRTSSERRVG
VEWHAVLREQRLMLTLSSEEGVSVQVALDGPFGVANKPQQALEQLHDLLGQLGTTLYHAD
RIELDAPQAYFIPNSQLKALRREAIEALTAARVQAHPRGGRKAETTPPPVYPESHLSFLA
NVYNQKARDFYHRHGVQLIDAAYEAHEEHGEVPVMITKHCLRFSFNLCPKQAKGVTGVRT
KVAPMQLIQGDEVLTLKFDCKPCEMHVIGKMKSHIIDLPTPGSAVAQVVGHISPEDLLKT
IPRGPH
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttccaaagaatcacctggaactgctcagccctgcccgtgacgtggccatcgcc
cgtgaagcgatcctgcacggcgctgacgccatctatatcggcggcccgagcttcggcgcg
cgccataacgcctgcaacgaagtcagcgatatcgccgagctggtcgagttcgcccatcgc
taccatgcacgcgtgttcaccaccatcaacaccatcctgcacgacaacgagctggaaccg
gcgcgcaagctgattcaccagctgtacgatgccggcgttgacgcgctgatcgtgcaggac
cttggggtgatggagctggacatcccgccgatcgagctgcatgccagcacccagaccgac
atccgcaccctggaacgggccaagttcctcgaccaggctggcttctcgcaactggtactg
gcgcgggagctgaacctgcagcaaatccgcgccatcgccgccgaaaccgatgccgccatc
gagttcttcatccacggcgcgctgtgcgtggcgttctctggccaatgcaacatttcccat
gcgcagaccggccgcagcgccaaccgtggtgattgctcgcaagcctgccgcctgccctac
acgctgaaagatgaccagggccgcgtggttgcgttcgagaaacacctgctgtcgatgaag
gacaacaaccagaccgccaacctggctgacctggtcgatgccggcgtgcgctcgttcaag
atcgagggccgctacaaggacatgggctatgtgaagaacatcaccgcccattaccgcaaa
gagctcgatgccatccttgaagaccgccctcagtacgcccgcgcgtccagcggccgtacc
gaacacttcttcctgcccgacccggataaaaccttccaccgcggcagcaccgactacttc
gtgaccgaccgcaaggtcgatatcggcgccttcgactcgccaaccttcaccggcctgccg
gtgggcgtagtcgaaaaggtcggcaagcgtgacatgcaagtggtcaccgacgtaccgctg
accaacggcgacggcctcaatgtgctggtcaagcgcgaagtggtgggcttccgcgccaac
atcgccgaaccgcgtggcgaattcgaagaagacggccagaagcgctaccgctatcgcgtc
gagcccaacgaaatgcccgaaggcctgcacaagctgcggcccaaccacccgctgtcgcgc
aacctcgaccacaattggcaacaggccctgcaacgcacctcctccgaacgccgggtcggc
gtggagtggcacgctgtcctgcgcgagcagcgcctgatgcttaccctcagcagtgaagaa
ggcgtgagcgtgcaggtggccctggacggcccattcggcgtagccaacaagccgcagcag
gcactggagcagttgcacgacctgctcggccagttgggcaccaccctgtaccacgccgac
cgcatcgaactggatgccccgcaggcgtacttcattcccaactcgcagctcaaggccctg
cgccgcgaagccatcgaggcactgactgcagcacgcgtgcaggcgcatccgcgtggcggg
cgcaaggccgagaccacgccaccgccggtgtaccccgagtcgcacctgtcgttcctggcc
aacgtatacaaccagaaggcccgcgacttctaccaccgccacggtgtgcaactgatcgat
gcggcctatgaagcgcatgaagaacacggcgaagtgccggtgatgatcaccaagcactgc
ctgcgcttctccttcaacctgtgccccaagcaggccaagggcgtgaccggcgtgcgtacc
aaggtggcaccgatgcagctgattcagggtgacgaagtgctgaccctgaagttcgactgc
aagccgtgcgagatgcatgtgatcggcaagatgaagagccacatcatcgacctgccgacc
ccgggcagcgcggtggcccaggtggtggggcatatcagccccgaagacttgctcaagacc
atcccgcgcggaccgcactga
DBGET
integrated database retrieval system