Pseudomonas putida DOT-T1E: T1E_2041
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Entry
T1E_2041 CDS
T02181
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T1E_2041
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppx02000
]
T1E_2041
Transporters [BR:
ppx02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
T1E_2041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AFO47889
UniProt:
I7C824
LinkDB
All DBs
Position
2235622..2236845
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AA seq
407 aa
AA seq
DB search
MSGPVTLRVLGTSVTLLESIRLRAERELGIRIEYQVHDVQTVQRIALMHPESYDLYDQWF
HSMDFVWPAGAIQPIDIRRVALWDEINDLAKRGRLHAGDKLAGGSLPCDRLYVQHDRSLA
NHPTDSISMLPLTHNADSFAYRPDLLPPGFGIENESWSWLVDPGWCGHVALQSDAAIGAL
DAALAVQAKGLAKFDVIGNLRLDEIDELADVLIKLQRQGHFAAFWSDDRDASKLMLGPNV
HIESVWSPALMQLHREGIQYRQAVPKEGYRGWFGGLSLSRAVDGAVKDVAYAYLNWWLAG
WPGAMMARQGFYISNPLRARDHLSAAEWDYWYEGKPASEQLLGSDGEPLIGPGEIREGGS
YAERVSRISVWNSVMDEHNYLVRKWAAFLRAGRSKELSSTAGSLGIP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccctgtcacgttgagagtactgggtacctctgtgaccttgctcgagtctatt
cgcttgcgcgcggagcgagagctgggcattcgaattgagtaccaagtccatgacgttcaa
acggttcagcgcattgcgttgatgcaccccgagagctatgacctttacgatcaatggttc
catagcatggattttgtctggcccgcaggcgcaatccagcccattgatatcaggcgagtt
gctttgtgggatgagatcaatgacctggccaagcgcggccgacttcatgctggcgataag
ctagcgggcggtagcctgccttgcgaccgtttgtatgttcagcatgatcgtagcttggcc
aatcacccaactgactcaatcagtatgttgccgctcacgcacaatgcggacagctttgcc
tacaggccagacctgcttccccctgggtttggtatcgaaaacgaaagttggtcctggctt
gttgatcctggctggtgcggtcatgtggctttgcagagcgatgcagctatcggggcgctg
gacgcggcgctggcagtgcaggctaagggcctggccaagttcgacgtaattggcaacctt
cggctggatgagatcgatgagctcgcggatgtgctcatcaagctccaacgccaagggcat
tttgcggctttctggtcggatgatcgtgatgccagtaagctaatgcttggcccaaacgtt
cacattgagagtgtctggtctccagcgctgatgcagctgcatcgcgaaggcattcagtat
cgccaggcagttcctaaagaaggctaccggggctggttcggcggcttatcgttgtctcgg
gctgttgatggtgcagtgaaagatgtggcttacgcctatctgaactggtggttggcaggt
tggccaggcgcgatgatggcgcgacagggcttctacatttccaatccactgcgagctcga
gatcacctgtccgctgcggaatgggattactggtacgaaggcaagccagccagcgaacag
ttgcttgggagtgatggtgaaccactcattgggcctggagaaataagggaagggggctcc
tacgccgagcgagtgagccgaatcagcgtctggaactcggtgatggatgagcataactac
cttgtccgcaaatgggctgcatttcttagagcgggccgctcgaaggagctgtcatccaca
gctggaagcttgggcattccttag
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