Pseudomonas putida DOT-T1E: T1E_2044
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Entry
T1E_2044 CDS
T02181
Symbol
soxA1
Name
(GenBank) sarcosine oxidase, alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00260
Glycine, serine and threonine metabolism
ppx01100
Metabolic pathways
Module
ppx_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
T1E_2044 (soxA1)
Enzymes [BR:
ppx01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
T1E_2044 (soxA1)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
T1E_2044 (soxA1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
FAD_binding_2
GIDA
HI0933_like
Thi4
DAO
Pyr_redox
FAD_binding_3
Lycopene_cycl
AlaDh_PNT_C
POPLD
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AFO47892
UniProt:
I7BUM9
LinkDB
All DBs
Position
complement(2238434..2241331)
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AA seq
965 aa
AA seq
DB search
MSRLPAPMGLLIDRNQPLHFSFDGKAYQGFAGDSIASALLANGRFLLSRSFKYHRPRGPL
TMAGQDANTLVQLPSEPNVLADTHLLESGAQVTGQNFNGSLDNDKDAYLGKFSKFMPVGF
YYRSFYKPKGAWKLWEPIIRKKAGLGVLDLKFQPEYYDKAYLFADLAVVGAGPAGLQAAL
TAANAGAKVLLIEQQPILGGSLTYARFDVENNRADSLRRELINAVEGHANIQVLKKATCN
AWFTDNYLPVIQGKRMYKVRATQCLIASGSFDQPVIFRNNDLPGVMLSSAAQRLMKLYAV
KPGKRAVVLTGNDDGYYAALDLHEQGVQVAALVDMRTNPADRALLIALEKRGIPCHLNST
VFEALHEKGMRHVSGVDIRKITGLGQVANSSLHLDCDLLCMSGGYMPVYQLLCQAGGKLS
YDDQLAEFTLSGLPKNLSVAGSAHGFHALDNVLADATRTATEIITALGLVINVKPLPLRP
EAQVNFPWPIFPHPKGKDFVDFDEDLQVRDIINATKIGYRDVQLVKRYSTVGMGPSQGRH
SALPTARLVAASTQRSVSETGVTTARPPFEAEKLAHVAGRAFDPYRQTPMHRRHLEAGAK
MMPAGIWQRPAYYGKPSERDKCMQAEALHVRRKVGIIDVSTLGGLDVRGPDAAELLNRMY
TFAFLKQPVGRSRYALMTNEHGVVIDDGVCARFAENHFYVTATTSGVDRIYQQMLKWNAQ
WRLNVDIANVTAAISAVNVAGPDSRKVLEKVCADLDLSAEGFPYLGVRLGTVAGIKARLL
RVGFVGELGYEIHVPARYALKLWDALIEAGKEFDIRPFGVETQRLLRLEKGHVIISQDTD
GMTHPGEIDMGWAVSRNKPFFVGRRSVDILEAQPQKRKLVGFTLPKTSPQPLEGHLVLKG
PDISGNVTSCEYSQSLDQIIGLAYAAFDQSTPGQQIPIRVEDGVVVQATVVKLPFFDPDN
QRQEL
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcctacccgctcccatgggcttgttgatcgaccgcaatcagccgcttcatttc
agctttgatggcaaagcgtatcaagggtttgcaggtgacagcatcgcaagtgccctgctc
gccaatggtcgcttcctgctctcccgctcgttcaagtatcaccgcccgcgcggcccgctg
accatggcaggtcaagacgccaataccctggtacagctaccgagcgagcccaacgtcctg
gcggacactcacctgctggaaagtggtgcgcaggtgaccgggcaaaacttcaacggctct
ctggacaacgacaaagacgcctatcttggcaagttctccaaattcatgccggttggtttc
tactaccgctctttctacaagcctaagggtgcatggaaactatgggagcccatcattcgc
aaaaaggccggactcggcgtcttggatctcaaattccagcccgagtactacgacaaggcc
tacctgttcgctgacctcgcggttgtcggcgctggccctgctggactgcaggcggcactg
actgcggccaatgcaggcgcaaaggtgttgttgattgagcaacaacccattctgggcggc
tcactgacctatgcccgtttcgatgtcgaaaacaatcgtgccgatagcctacgccgcgag
ctgatcaacgctgttgaaggccacgccaacattcaagtgctgaagaaagctacgtgcaat
gcatggttcaccgataactatctgccggtgattcagggtaaacgcatgtacaaggtgcgc
gccacccaatgcctgatcgccagcggctcgtttgatcagccagtgattttccgcaacaac
gatttgcctggggtgatgcttagcagcgcagcccaacgcctgatgaaactctacgccgta
aagcctggcaaacgcgcagtggtactcacggggaacgacgacggttactacgcagcgctc
gatctgcacgagcaaggtgttcaggttgcagcgctggtggacatgcgtaccaatcccgct
gatcgcgcgttgctgatcgcgctggaaaagcgcggaatcccctgtcatctgaacagcacg
gtgtttgaagcgctgcatgaaaaaggcatgcgccatgtcagcggcgtcgacatccgaaaa
atcaccggcctcggccaggtcgcgaatagcagcttgcacctggattgcgatttgctctgc
atgtccggcggctacatgccggtctatcaattgctgtgccaagccggcggcaagctgtct
tatgacgatcaactggctgagttcacccttagcggcctgccgaagaatctcagcgttgca
ggttccgcccatggtttccacgcactggacaacgtgctcgctgatgccactcgcacagcc
accgaaatcattacagcgctaggcctggtcatcaacgtcaagcccctgccgctgcgccca
gaagcgcaagtcaattttccatggccgattttcccgcaccccaaaggcaaggactttgtc
gacttcgacgaagatttgcaggtgcgcgatatcattaacgccacgaagatcggctatcga
gatgtgcaactggtcaagcgctactccaccgtgggcatggggccttctcaagggcgccac
tcagccctgccaacagctcgactggtggcagcgtccactcagcgcagcgtcagcgaaaca
ggcgtaaccacagcgcgccctccctttgaggcggagaagctggcccatgtcgcggggcga
gcgtttgatccgtaccgccagacacccatgcaccgccgtcatctggaagccggcgcaaaa
atgatgcctgccggtatctggcagcgccctgcctattacggcaaaccgagcgagcgggat
aaatgcatgcaggccgaggcgctgcacgtgcgccggaaggtcggcatcatcgacgtttcg
acgctgggcggtctggacgtgcgcggccctgacgctgccgaacttctcaaccgcatgtac
accttcgcatttctcaagcagcccgtgggtcgctcacgctacgcgctgatgaccaacgaa
catggcgtggtgatcgacgatggcgtctgcgcgcgctttgccgaaaaccacttctacgtc
actgccaccaccagcggcgtggatcgaatctatcagcagatgctcaagtggaacgcgcaa
tggcgcctgaacgtcgacatcgctaacgtcactgccgcgatctcggcagtcaacgtagcg
gggcccgactcacgcaaggtgctggagaaggtgtgcgcggatcttgatctgtccgctgaa
ggattcccatacctgggcgttcgcctgggcaccgtggccgggatcaaggcacggctcctg
cgcgtaggcttcgtaggggaattgggttacgaaatccacgtacctgcacgttatgcgttg
aagctttgggatgcactgatagaggccggcaaggaattcgacattcgcccgtttggtgtc
gagacccagcgcctgctgcgcctggaaaaaggccatgtgatcatcagccaggacaccgac
ggcatgacccatcctggcgaaatcgacatggggtgggcggtcagccgtaacaagccgttc
tttgtcggtcgtcgctccgtcgacatccttgaagcgcagccacagaaacgcaagctggtg
ggcttcacgctgcccaagaccagcccgcaaccgctcgagggccatctggttctcaagggg
ccggacatcagcggtaatgtgacgtcctgtgagtattcgcaaagccttgatcagatcatc
ggcctggcctacgccgcctttgatcagagcactccggggcagcagattccgatccgagtt
gaagatggtgtggtcgtccaggcaaccgtcgtaaagctccccttcttcgatccagacaac
cagcgccaggagctttga
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