Pseudomonas putida DOT-T1E: T1E_2127
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Entry
T1E_2127 CDS
T02181
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00550
Peptidoglycan biosynthesis
ppx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T1E_2127 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppx01003
]
T1E_2127 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppx01011
]
T1E_2127 (mrcB)
Enzymes [BR:
ppx01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
T1E_2127 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
T1E_2127 (mrcB)
Glycosyltransferases [BR:
ppx01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
T1E_2127 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppx01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
T1E_2127 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
AFO47975
UniProt:
I7AZ52
LinkDB
All DBs
Position
2323916..2326162
Genome browser
AA seq
748 aa
AA seq
DB search
MKLSLVGLVIVAGFAVYLDAVVQEKFSGKRWTIPAKVYARPLELFTGQKLSKNDFLTELD
ALGYRRESAANGPGAASVSGNTVDLNTRGFQFYEGMEPAQFVRVRFSGDYVAGLSGANGK
ALDVVRLEPLMIGGIYPKNLEDRILIKIDQVPKYLLETLVATEDREFYSHYGVSPKSIAR
AMWVNTSSGSMRQGGSTLTQQLVKNFYLSSERSLSRKLTEAMMAVLLELHYDKREILEAY
LNEVFVGQDGQRAVHGFGLASQFFFSQPLSELKLHQIALLVGMVKGPSYYNPRRHPERAL
ARRNLVLDLVAEQGVASQAEVDAAKKMPLGVTKRGSLADSSFPAFLDLVKRQLRQDYRDE
DLTEEGLRIFTSFDPILQMKAETSMSETFKRLAGRKGADDVEAAMVVTNPETGEVQALIG
SRQAGFAGFNRAIDAVRPIGSLVKPSVYLTALEQPSKYTLTSWVQDEPFSVKGADGQVWR
PQNYDRRPHGTIYLYQGLANSYNLSTAKLGLEVGVPNVIKTIGRLGVNVDWPAFPAMLLG
AGGMSPMQVATMYQTIANGGFNTPMRGIRSVLTAEGEPLKRYPFQIQQTFDPGAIYLVQN
AMQRVMREGTGRSVYNTLPRSLTLAGKTGTSNDSRDSWFSGFSQDLLAVVWMGRDDNGKT
PFTGATGALQVWTSFMKKADPLPLDMPQPDNVVQAWIDPYTGHGSDASCPGAVQMPYIRG
SEPPAGATCGGEQDPVESVMDWVKGWMN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctcagcctggttggcctggtgatcgtcgccggcttcgcggtttacctcgatgcc
gtcgtccaggaaaagttctccggcaagcgctggaccatcccggccaaagtgtatgcccga
ccgctggagctgttcaccggccagaagttgagcaagaacgacttcctcaccgagctcgat
gcgctcggctaccgtcgcgaaagcgccgccaatggcccgggcgctgcgtccgtcagcggc
aataccgtcgacctcaatacccgtggcttccagttctacgagggcatggaaccggcgcag
ttcgtccgcgtgcgcttctctggcgattacgttgcgggcctttccggtgccaatggcaag
gcgcttgacgtggtgcggctggagccgctgatgatcggcggcatctacccgaaaaatctc
gaagaccgcatcctgatcaagatcgatcaggtacccaaatatctgctcgaaaccttggtg
gccacggaagaccgcgagttttacagccactacggcgtgtcgccaaagtccatcgcccgg
gccatgtgggtcaacacgtcgtccggctcgatgcgccagggtggcagtaccctgacccag
cagttggtgaagaacttctacctcagcagcgagcgcagcctcagccgcaagctgaccgag
gcgatgatggcggtcctgctcgaactgcactacgacaagcgtgagatccttgaggcttac
ctcaacgaggtgttcgtcggccaggacggtcaacgcgcggtgcacggctttggtctggcg
agtcagttcttcttcagccagccgctgtccgagctgaaactgcatcagatcgccctgctg
gtgggcatggtcaaaggcccgtcctactacaacccgcggcgtcaccccgagcgtgccttg
gctcgccgcaacctggtgctcgacctggtggccgagcagggcgtggccagccaggcagaa
gtcgatgcggcgaagaaaatgccgctgggcgtgaccaagcgtggcagcctggccgacagc
tcgttccctgccttcctcgacctggtcaagcgacagttgcgccaagattatcgcgacgaa
gacttgaccgaagaaggcctgcgcatctttaccagcttcgaccctatcctgcagatgaag
gccgaaacctcgatgagcgagaccttcaagcgcctggcgggccgcaagggggcagacgat
gtcgaagcggcaatggtcgtgaccaaccctgagaccggtgaagtacaggcgctgatcggt
agccgccaggcaggttttgccggcttcaaccgggccattgatgctgtacggccgatcggc
tccctggtcaaaccgtcggtatacctgactgcgctggagcagccgagcaagtacaccctg
accagttgggtgcaggacgagccattttcggtcaaaggggctgacggccaggtctggcgc
ccgcaaaactatgatcgccgcccgcatggcactatctacctgtaccaggggctggccaac
tcttacaacctgtcgaccgccaagctcggcctggaagtgggtgtgccgaacgtgatcaag
accattggtcgtttgggcgtgaatgtcgactggccagcgtttccggccatgttgctgggg
gcgggtggcatgtcgccgatgcaggtcgcaaccatgtaccagaccatcgccaacggcggc
ttcaacacgccgatgcgcggtatccgcagcgtgctcaccgccgagggcgagccgctcaag
cgctacccgttccagatccagcaaaccttcgacccgggtgccatttacctggtgcagaac
gccatgcagcgtgtaatgcgcgaaggtacagggcgttcggtgtacaacaccttgccacgc
tcgctgaccctggcgggcaagaccggtaccagtaacgactcgcgtgacagctggttctcc
ggctttagtcaggatctgctggccgtggtgtggatgggccgtgacgataacggcaagaca
ccgtttaccggcgccaccggcgccttgcaggtgtggaccagcttcatgaagaaagccgac
ccgctgccgctggatatgccgcaaccggataacgtggtgcaggcctggatcgacccttac
acaggccatgggtctgatgccagctgtccgggagcggtgcagatgccgtatattcgcggg
agtgagccgccggccggcgcaacctgtggcggcgagcaggacccagtcgaatcggtaatg
gactgggtcaagggctggatgaattaa
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