Pseudomonas putida DOT-T1E: T1E_2200
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Entry
T1E_2200 CDS
T02181
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx03030
DNA replication
ppx03430
Mismatch repair
ppx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T1E_2200
03430 Mismatch repair
T1E_2200
03440 Homologous recombination
T1E_2200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppx03032
]
T1E_2200
03400 DNA repair and recombination proteins [BR:
ppx03400
]
T1E_2200
Enzymes [BR:
ppx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T1E_2200
DNA replication proteins [BR:
ppx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T1E_2200
DNA repair and recombination proteins [BR:
ppx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T1E_2200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DUF6621
Motif
Other DBs
NCBI-ProteinID:
AFO48048
UniProt:
I7B9I8
LinkDB
All DBs
Position
2409737..2410447
Genome browser
AA seq
236 aa
AA seq
DB search
MSLFAWLRPSAPELDHAKRQRLARLPKPVPLGVCTLREQRWVVLDLETSGLNPNRDQVLS
IGAVAIEDGAIDFAQQFERTLHRPLQKTNASVLIHGLGPSALAAGCDPAEALLDLLDFIG
NSPVLAFHAPFDQRMLARALKETLGHRLQSMFLDVAELAPMLNPDTVLREAGLDDWVARF
GLQVEERHHASADAQVTAELALILFSQARRQQLDSPLQLEQRLRGWRRRKMQSHCL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcgcctggctgcgccccagcgcgcccgagctggaccacgccaagcgccag
cgcctggcccggttgcccaagcccgtgccgctgggggtatgtaccctgcgtgagcagcgc
tgggtggtgctggacctggaaaccagcgggctcaaccccaaccgtgatcaggtactgtcg
attggggcggtggccatcgaagacggagccatcgactttgcccagcagttcgaacgcaca
ctgcaccggcctttgcagaagaccaacgccagcgtactgatccacggcttgggccccagc
gcattggctgccggttgcgacccggccgaggccttgctggatttactcgatttcattggc
aacagcccggtgctggcgtttcacgcgccattcgaccagcgcatgctggcccgtgcgctg
aaagagacccttgggcatcgcttgcagtcaatgttcctcgacgttgccgaactggcaccg
atgctcaacccagacacggtactgcgcgaggccgggctggatgactgggtggcacggttt
ggcttgcaggttgaagaacgccatcatgccagtgccgatgcccaggtgactgcagaactg
gcgctgatcctgttcagccaggcccggcgccagcagctggacagcccgctgcagcttgag
caacggttgcgcgggtggcgacggcgcaagatgcagagtcattgtttgtaa
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