Pseudomonas putida DOT-T1E: T1E_2241
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Entry
T1E_2241 CDS
T02181
Symbol
ybiO
Name
(GenBank) MscS mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppx02000
]
T1E_2241 (ybiO)
Transporters [BR:
ppx02000
]
Other transporters
Pores ion channels [TC:
1
]
T1E_2241 (ybiO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
UPF0239
Bacillus_HBL
Motif
Other DBs
NCBI-ProteinID:
AFO48089
UniProt:
I7C8L6
LinkDB
All DBs
Position
complement(2449199..2451346)
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AA seq
715 aa
AA seq
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MPALLRYLFLLLLLFIAPVQAAGLPGLLGGSAPAQPEATEPLGKSLDEVIKNLENDQQRA
KLLADLKKLRDATRQSQPSVEQGVLGLIGGALHDFEKQFSGDASPFHRWAAEIEQAQAEL
TELVVPVHQWPPILFGFAAVIVVWSVLAYAFNWVGHRVRLRFGLSEELPQHPRTWDLVRF
ALRKLGPWLVALVFTVYLSFVLPPSLGKSLAMVLAYALVVGTCFSAICVIAFSLLDGPHR
HRALHILRRQAFRPLWLIGSFAAFGEAMSDPRMLVALGTHLAHALATLANVIAALCTGLF
ILRFRRPIAHLIRNQPLSRRLTRRTLSDTIEILGSFWFIPALILVAISLFATFVSAGDTS
TALRQSLMCTVLVVVCMVLNGLVRRHAANPKRAGKRQAVYTERLRNFGYLLVHLFIWLVF
IELGLRVWGVSMISFAEGDGHDISLRLLGLAGTLIVAWLVWILADTAVHHALVRSRRGLA
NARAQTMMPLIRNVMFVVIFIIAVIVALANMGMNVTPLLAGAGVIGLAIGFGAQSLVADL
ITGLFIIIEDSLAIDDYVDVGGHLGTVEGLTIRTVRLRDIDGIVHTIPFSEIKSIKNYSR
EFGYAIFRVAIPHSMNIDQAITLVREVGQKLRNDPLMRRNIWSPLELQGVESFESGSAIL
RARFKTAPIKQWEVSRAFNLALKRQLDEAGLDLATPRLSVQVVTAGGGGMTEARS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgccctcctgcgttacctgttcctgttgcttttgctgttcatcgccccggtacaa
gcggcgggcttgcctggcctgctgggcggcagcgcgcccgcgcagccagaagccaccgag
ccgctgggcaagtcgctggacgaggtgatcaagaacctcgaaaacgaccagcaacgggcc
aagctgctggccgacctgaaaaaactgcgcgacgccacccggcaatcgcaacccagcgtt
gaacagggcgtgctcggcctgatcggcggtgccctgcatgactttgaaaaacagttcagc
ggcgatgccagtccattccaccgctgggccgcggaaatcgaacaagcccaggccgaactg
accgagctggtggtgcccgtgcaccagtggccgccaatcctgttcggttttgctgcagtg
attgtcgtgtggagtgtgctggcctacgccttcaactgggtcggccatcgggtacgcctg
cgctttggcctgagcgaagaactgccacagcacccgcgtacctgggacctggtgcgcttt
gccttgcgcaagctcggcccctggctggtagcgctggtgttcacggtgtacctgagtttc
gtgctgccgccatcgctgggcaaatccctggccatggtgctggcctacgcactggtggtc
ggcacctgcttttcggccatttgcgtcatcgccttttccttgctggacggcccacaccgc
caccgcgccctgcacatcctgcggcgccaggcgtttcgcccgttgtggctgatcggcagc
ttcgccgcgtttggcgaggcgatgagcgatccacgcatgctggttgccctcggtacccac
ctggcccacgccctggctaccctggccaatgtgattgcggcactgtgcaccgggctgttc
atcctgcgcttccgccggccgatcgcccacctgatccgcaaccagccactgtcgcggcgc
ctgacccgacgcaccctcagcgataccatcgagatcctcggcagcttctggttcattccg
gcgctgatcctggtggccatttcgctgttcgccaccttcgtctccgccggcgacaccagc
accgccctgcggcagtcgctgatgtgcacggtgctggtggtggtgtgcatggtgctcaac
ggcctggtgcgccgccatgccgccaaccccaagcgggccggcaagcgccaggcggtgtac
accgaacgcctgcgcaacttcggctacctgctggtgcacctgttcatctggctggtgttc
atcgagttgggcttgcgcgtgtggggcgtgtcgatgatcagcttcgccgagggcgacggc
catgacatcagcctgcgcctgctgggcctggccggcacactgatcgtggcctggctggtg
tggatccttgccgacaccgccgtacaccatgccctggtgcgctcgcgccgggggctggcc
aacgcccgtgcgcaaaccatgatgccgttgatccgcaacgtgatgttcgtggtcatcttc
atcatcgcggtcatcgtcgccctggccaacatgggcatgaacgtcaccccgctgctggcc
ggtgccggtgtgatcggcctggccatcggttttggcgcgcagtcgctggtggccgacctg
atcaccggcctgttcatcatcatcgaagattcgctggccatcgacgactacgtggatgtc
ggcggccacctgggcacggtggaagggttgaccattcgtaccgtgcgcctgcgcgacatc
gacggcattgtgcataccatcccgttcagcgaaatcaagagcatcaagaactactcgcgg
gagttcggctacgcgatcttccgcgtggcaatcccgcacagcatgaacatcgaccaggcg
atcacgctggttcgcgaagtggggcagaagctgcgcaatgacccactgatgcgccgcaat
atctggtcgccgctggagctacagggggtggagagctttgagtcagggtcggcgatcttg
cgggcgcggttcaagaccgcaccgatcaagcagtgggaggtgtcgcgggcgttcaacctg
gccttgaagcggcagctggatgaagccgggctggacctggcgacgccgcggttgtcggtg
caggtggtgacagccggtgggggtgggatgacagaggcccgctcgtag
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