Pseudomonas putida DOT-T1E: T1E_2284
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Entry
T1E_2284 CDS
T02181
Name
(GenBank) ECF subfamily RNA polymerase sigma-24 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
T1E_2284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppx03021
]
T1E_2284
Transcription machinery [BR:
ppx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
T1E_2284
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_23
DUF6362
Motif
Other DBs
NCBI-ProteinID:
AFO48132
LinkDB
All DBs
Position
2499957..2500469
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AA seq
170 aa
AA seq
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MIDAAPPPEPGLPALYREHRGWLETWLRRRMGNAWDAADLSQDTFLRILASAQPLADIRE
PRAYLLTVGKRLLSNFHQRRSLERAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDG
LKPPIRKAFLWSQLEGLGYAEIGQRLGVCQRSVKRYMAQAYEHCLLAELQ
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgccgcgccgccaccggagcctggcctgcctgccctgtaccgggagcatcgc
ggctggcttgaaacctggctgcgccggcgtatgggcaatgcctgggatgccgccgacctc
agtcaggatacttttctgcgcattctggccagcgcccagccgctggcagacatacgcgaa
ccgcgtgcctacctgctgaccgtgggcaagcgtttgctcagcaacttccaccagcgccgt
agcctggagcgggcctaccttgatgccttggcgcagttgcccgagcaacacgtgccgtcg
ccagaacagcgctgggtactgctcgaaaccctgcaagcactggatgaattgctcgacggc
ctcaagccgccgatacgcaaggcctttctctggagccagctggaaggcttgggctacgcc
gagattggccagcgcctgggcgtctgccagcgctcggtgaaacgctacatggcgcaggct
tacgaacattgcctgttggccgagttgcaatga
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