Pseudomonas putida DOT-T1E: T1E_2732
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Entry
T1E_2732 CDS
T02181
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppx03400
]
T1E_2732
Enzymes [BR:
ppx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
T1E_2732
DNA repair and recombination proteins [BR:
ppx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
T1E_2732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AFO48571
UniProt:
I7C639
LinkDB
All DBs
Position
2981994..2983520
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AA seq
508 aa
AA seq
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MRLGLVLGDQLSFDLASLASLDPARDAVLMAEVEGEARYVPHHPLKIILIFSAMRHFAQA
LRERGWQVHYVELDAEGNSGSIVGELRRWQQALGATHIHLTECGEWRLEQALRDAELPLV
WFRDTRFLCSREAFGRWATEPRQLRMEHFYRGMRKRTGLLMEPDGSPAGGAWNFDGDNRK
PLPRQLRGPFAAHFAQDDITAAVVALVRQRFSDHYGGVDGFDYPVTHAEAQQLWQHFLDF
GLAAFGDYQDAMAEGEPYLFHARISAALNIGLLDVRRLCDDVDKAWREGRVPLNAAEGFI
RQLIGWREYVRGIYWQRMPAYAGLNHLNNDRALPEFYWTGHTRMRCMAQAIGQTLRLGYA
HHIQRLMVTGNFALLAGIVPTAICEWYLAVYMDAFEWVELPNTLGMVMHADGGYLGSKPY
CASGRYIQRMSDHCKACSYRVDQVTEEEACPFNALYWHFLIRHRPQLSANPRLALVYRSL
DGMPAGRRDAVWQRGQSLLARLDAGQAL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgggcctggtgctgggtgaccaactgtcgttcgacctggcaagtctggcgtcc
cttgaccctgctcgcgatgcggtcctgatggcggaagtggagggggaggcccgatacgta
ccgcatcatccgctgaagatcattctcatcttcagcgccatgcggcattttgcccaggcc
ctgcgtgaacggggttggcaggtgcactatgtcgagctggatgccgagggtaacagcggc
agcatcgtgggggagttgcgtcgatggcaacaagccttgggcgctacccacattcacttg
accgagtgcggtgagtggcgcctggagcaggccttgcgtgatgccgagctgccgcttgta
tggtttcgcgacacgcgttttctgtgctcccgtgaagccttcgggcgctgggccacagaa
cctcgccaactgcgtatggagcacttctaccgtggcatgcgcaagcgaaccggcctgctc
atggagcctgacggcagcccggcaggtggggcctggaatttcgatggcgacaatcgcaag
ccattgccacggcagctgcgtggcccgttcgctgcgcatttcgcgcaagacgacatcacg
gcagcggtggtggccttggtgcgtcagcgcttcagcgaccactacgggggcgtcgacggt
ttcgactaccccgtgacccacgccgaggcacaacagctgtggcagcattttctggatttc
ggcctggcggctttcggtgactaccaggatgcgatggccgaaggcgagccgtacctgttt
catgcgcgcatcagtgcggcgctcaacatcgggcttctggatgtgcgtcgtttgtgcgac
gacgtcgacaaagcctggcgcgaggggcgggtgccgctcaatgcagccgaaggcttcatt
cgccagttgatcggctggcgtgaatatgtgcgtggcatctattggcagcgcatgccggcg
tatgccgggctcaatcacctgaacaacgaccgggcgctgccagaattctactggaccggg
cacacccgcatgcgctgcatggcccaagccatcgggcagaccctgcggttgggctacgct
caccatatccagcgcttgatggttaccggcaacttcgccttgctggccggtatcgtgcca
accgcgatttgtgagtggtacctggcggtctacatggatgccttcgagtgggtcgaactg
cccaacacgcttggcatggtgatgcacgccgatggcggctacctggggtccaagccgtac
tgcgccagtggtcgttatatccagcgcatgtccgatcattgcaaggcttgcagttacagg
gtcgaccaggtaaccgaagaggaggcctgcccgttcaatgccttgtattggcattttctc
attcgccatcgcccccagctctcggctaacccgcgcctggccctggtctatcgcagcctc
gatggcatgcccgctggccgtcgcgatgctgtgtggcaacgtggccagtcattgctggcg
cggctcgatgcggggcaggcgttatga
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