Pseudomonas putida DOT-T1E: T1E_2861
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Entry
T1E_2861 CDS
T02181
Symbol
ydcT
Name
(GenBank) spermidine/putrescine ABC transporter ATPase subunit
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T1E_2861 (ydcT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppx02000
]
T1E_2861 (ydcT)
Transporters [BR:
ppx02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
T1E_2861 (ydcT)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
nSTAND_NTPase5
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AFO48700
UniProt:
I7B104
LinkDB
All DBs
Position
complement(3125904..3126935)
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AA seq
343 aa
AA seq
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MPLAVQFTQVSRTFGEVKAVDQVSIDIIDGEFFSMLGPSGSGKTTCLRLIAGFEQPSSGS
IRIQGVEAAGLPPYQRDVNTVFQDYALFPHMNVLDNIAYGLKVKGVGKAERYSRAEEALA
MVALAGYGARKPAQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQGELKKL
QRQLGITFIFVTHDQTEALSMSDRVAVFNRGRIEQVDTPRNLYMKPSTTFVAEFVGTSNV
VRGELAMQLNGSPAPFSIRPEHIRLGDPVVTSHEVQVSGVLRDVQYQGSATRYELQLENG
QLLAVSQANDRWQKQVQAWQPGQRLQAHWPREAMTVLQETEGR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcccctagccgtccagttcacccaggtttcccgcaccttcggcgaggtcaaggccgtc
gaccaggtcagcatcgacatcatcgatggcgagttcttttccatgctcggcccttccggc
tcgggcaagaccacctgcctgcgcctgatcgcaggcttcgagcaaccctccagcggctcg
atccgcatccaaggggtcgaggccgctggcctgccgccctaccaacgtgacgtcaacaca
gtgttccaggactatgcgctgttcccgcacatgaacgtgctggacaacatcgcctatggc
ctgaaggtaaaaggcgtgggcaaggccgaacgctacagccgcgccgaagaagccctggcc
atggtggccttggccggctatggcgcgcgtaagccggcacagctgtctggcggccagcgt
cagcgcgtggccctggcccgggcgttggtcaaccgcccgcgggtgctgctgctcgatgag
ccactgggcgcgctggacctgaaattgcgcgagcagatgcaaggcgagctgaaaaagctg
caacgccaactgggcatcaccttcatcttcgtcacccacgaccagaccgaagcactgtcg
atgtccgaccgggtcgcggtgttcaaccgcggccgtatcgaacaggtcgacaccccgcgc
aacctgtacatgaagcccagcacaaccttcgtcgctgaattcgtcggcacgtccaacgtg
gtgcggggcgagctggccatgcagctcaacggcagccctgcgcccttctccatccgtccc
gaacacattcgcctgggcgacccggtagtgaccagccatgaggtacaggtcagcggcgtg
ctgcgtgatgtccagtaccaaggcagcgccacacgctacgaactgcagctggaaaacggt
caactgctggcagtaagccaggccaatgaccgctggcaaaagcaggtgcaggcctggcag
cccgggcaacgcctgcaggcgcactggccccgcgaggccatgacggtgctgcaggaaacc
gagggccgctga
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