Pseudomonas putida DOT-T1E: T1E_3016
Help
Entry
T1E_3016 CDS
T02181
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppx03032
]
T1E_3016 (gyrA)
03400 DNA repair and recombination proteins [BR:
ppx03400
]
T1E_3016 (gyrA)
Enzymes [BR:
ppx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
T1E_3016 (gyrA)
DNA replication proteins [BR:
ppx03032
]
Prokaryotic type
DNA Topoisomerases
T1E_3016 (gyrA)
DNA repair and recombination proteins [BR:
ppx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
T1E_3016 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AFO48853
UniProt:
I7BBI5
LinkDB
All DBs
Position
3295718..3298477
Genome browser
AA seq
919 aa
AA seq
DB search
MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPEVTIDELMQFIPGPDFPTAGIINGRQGIIEAYRTGRGRI
YMRARSEIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA
VQVMVERAGADACRPEDLPEQYGLHDGKYFLSPEQAQAILDLRLHRLTGLEHEKLLAEYQ
EILEQIGELIRILSSAERLMEVIREELEAIRAEYGDVRRTEILNASHDLNYGDMIPEEER
VVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFSSKGKV
YWKKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADLDEELDEADDTV
LEGELVEAEEVDEEDGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGLIALKL
KEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQRIISML
IPESGSQILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQEGEEIM
LISDQGTLVRTRVGEVSSLSRNTQGVTLIKLAADETLVGLERIQEPSEDELDEVIEADEE
GVEAEAPDEAAGAEEAPQE
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgaactgagacagtct
tacctcgactacgcgatgagcgtgattgtcgggcgagcgctgcccgatgcgcgtgacggc
ttgaagcccgtgcatcgccgcgttctctatgcgatgagcgaactgggcaacgactggaac
aagccgtacaagaaatccgcccgtgtggtcggtgacgtgatcggtaagtaccacccgcac
ggcgacactgcggtctacgacaccatcgtgcgtatggcccagccgttctcgttgcgctac
ctgctggtcgacggccagggcaacttcggttcggtggacggcgacaacgctgctgccatg
cgatacaccgaagtgcgcatgaccaaactggcccacgaactgctggccgacctgcacaag
gaaaccgtcgactgggtgcccaactacgacggcaccgagcagatcccggcggtcatgccg
acgcgtattcccaatctgctggtcaacggttccagcggtattgccgtgggcatggcgacc
aatatcccgccgcacaacctcggcgaggtcatcgatggctgcctggcgctcatcgacaac
ccggaagtcaccatcgatgagctgatgcagttcatccctggcccggacttcccgactgcc
ggcatcatcaacggtcgccagggcatcatcgaggcctatcgcaccggccgtggccgcatc
tacatgcgcgcccgctccgagatcgaagacatcgacaaggttggcggccgccagcagatc
gtgatcaccgagctgccgtaccagctgaacaaggcgcgcctgatcgaaaagatcgccgag
ctggtcaaagagaagaagatcgaaggcatcaccgagctgcgcgacgagtccgacaaggac
ggcatgcgcatcgtcatcgagctgcgtcgcggcgaggtgccggaggtggtgctcaacaac
ctctaccaacaaacccagctgcagagcgtattcggcatcaacgtggtggccctggtcgac
ggccgtccgcgcctgctcaacctcaaggacctgctcgaagcgttcgtccgccaccgccgt
gaagtggtgacccgccgtaccgtattcgagctgcgcaaggcccgtgagcgcggccatatc
cttgaaggccaggcggtcgcgctgtccaacatcgacccggtcattgccctgatcaaggcc
tcgccgacgccgtccgaagccaaggaagccctggtttccacaccgtgggaatccagtgcc
gtgcaggtcatggtcgagcgcgccggcgccgacgcctgccgccctgaggacctgccggag
cagtacggcctgcatgacggcaagtacttcctgtcgccggagcaggcccaggccattctc
gacctgcgcctgcaccgcctgaccggcctggagcacgagaaactgctggccgagtaccag
gaaatcctcgagcagatcggcgagttgatccgcatcctcagcagcgccgagcgcctgatg
gaagtgattcgcgaggagctggaggccatccgtgccgagtacggcgatgtgcgccgcacc
gaaatcctcaatgccagccacgacctcaactacggcgacatgatcccggaagaagagcgt
gtggtcaccatctcccatggtggttatgccaagacccagccattgtccgcctaccaggcc
cagcgccgcggcggcaaaggcaagtcggcgaccggcgtgaaggacgaggactacatcgag
cacctgctggtcgccaacagccatgccaccctgttgctgttctccagcaagggcaaggtg
tactggaagaagacctacgaaatccccgaagcgtcccgcgctgcccgcggtcgtccgctg
gtcaacctgctgccgctggaggagggtgagcgcatcaccgccatgctgcagatcgacctc
gaagcgctgcagcagaatgccgacctcgacgaagaactggacgaggctgatgacaccgtg
ctcgagggtgagctggtggaggccgaggaagtcgacgaagaagacggcgacaccccggag
tgggttgcagagccgaccggcgcgtacatcttcatggcgaccgcttccggtaccgtcaag
aagaccccgctggtgcagttcgcccgtccgcgctccaacggcctgatcgccctgaagctg
aaggaaggcgacaccctgattgccgcggccatcaccgatggcgccaaggaagtcatgatg
ttctccgacgctggcaaggtcattcgctttgccgagagcgtcgtgcgtgaaatgggtcgc
aacgcccgtggtgttcgcggcatgaaactgggcaaaggccagcggatcatctcgatgctg
atcccggagtccggctcgcagatcctcaccgcctccgagcgtggctttggcaagcgcacc
ccgctgtccaagttcccgcgtcgcggccgtggtggccagggtgtgatcgccatgggtacc
aaagggcgcaacggcctgctgatcggggctatccaggtgcaggaaggcgaggagatcatg
ctgatttccgaccagggcacgctggttcgcacccgggttggcgaagtgtccagcctgagc
cgcaacacccagggtgttacgctgatcaagctggcggccgatgagacactggtgggcctg
gagcgtatccaggagccgtccgaggacgaactcgatgaggtgatcgaggcggacgaggag
ggtgtcgaagccgaagcgccagacgaagctgcaggcgccgaagaggccccgcaagagtaa
DBGET
integrated database retrieval system
