Pseudomonas putida DOT-T1E: T1E_3398
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Entry
T1E_3398 CDS
T02181
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppx03000
]
T1E_3398
Transcription factors [BR:
ppx03000
]
Prokaryotic type
Helix-turn-helix
LysR family
T1E_3398
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
MarR_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AFO49234
UniProt:
I7CBH9
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Position
complement(3766684..3767877)
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AA seq
397 aa
AA seq
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MIDVELPNLMQVRAFIRVAELGSVSRATEVLFRAQSVVTRAIAELEARFAVPLFERHANG
MRLTDYGECLLPRAQRVLAELDGVPSLLGTAQGEPLYLFQARRLQVFVKLCETRHMQTVA
RHFGLSQPAVSAALKVLEGGCGQPLFVRTSRGLQPTVASRDILFPIRRALNELRLLDSDL
SAMQGTLRGVVHVGALPLGRSRILPDAILRFTAQHPQVRVVTNESPFDLLATELRVGDVD
FVLGALRPHDYASDLVGEPLINEEMVVLARRGHPLLHTHLTLKDVHQARWVLPRAGSPAR
QLLDNCFAAAGLTAPWPVVESADLAVIRGLLVRSDMLAAVSAHQLAYEIASSELQRLPLA
LPGTARAIGLMQRSGCLQSPAAVALMACIRQVITEQA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgtcgaactgcccaacctgatgcaagtccgcgcgttcatccgggtagccgag
ctgggcagcgtttcgcgggcgacggaagtgttgttccgtgctcagtccgtggtcacccgc
gccatcgccgagctggaggcgcgctttgccgtgcccctgttcgagcgccatgccaatggc
atgcgcctgaccgactatggcgagtgcctgctgccgcgcgcacagcgcgtgctggcggaa
ctggacggcgtgccgagtttgctgggcaccgcgcagggcgagcccctctacctgtttcag
gcgcggcgcctgcaggtgttcgtgaaactctgtgaaacacggcacatgcaaaccgtggcg
cggcacttcggccttagccagccggcggtcagtgcggccttgaaagtgctcgaaggcggg
tgtggacagcccttgttcgtgcgcacgtcgcgcggcctgcagcccactgtggccagccgg
gacattctgttccccatccgccgggcgctgaacgagttgcgcctgctggacagtgacctg
agcgcgatgcaaggcaccctgcgcggggtggtgcatgtcggcgcgttgccattgggccgc
tcgcgcattctaccggacgccattttacgcttcacggcccagcacccacaggttcgggtg
gtgaccaacgaaagcccgttcgacctgctggcaaccgagctgcgggtaggggatgtggat
ttcgtcttgggcgccttgcggcctcacgattatgccagcgacctggtgggcgagccgctc
atcaacgaggaaatggtggtgctggcccgtcgagggcacccgctgttgcacacacacctg
acgctcaaggacgtgcaccaggcgcgctgggtgttgccgcgggccggttcgccggcccgc
cagctgctcgacaactgtttcgccgccgcgggcctgacagcgccgtggccggtggtggaa
agcgctgatctggcggttatccgtggcctgctggtgcgttcggacatgctggcggcggtg
tctgcgcaccagttggcttacgagattgccagcagcgaactgcaacgcctgccgctggca
ctgcccggcactgcccgcgccatcggcctcatgcagcgcagtggctgcctgcagtcaccg
gcggcagtcgcgctgatggcctgtatccgccaggttatcaccgagcaggcgtga
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