KEGG   Pseudomonas putida DOT-T1E: T1E_3517
Entry
T1E_3517          CDS       T02181                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ppx  Pseudomonas putida DOT-T1E
Pathway
ppx00740  Riboflavin metabolism
ppx01100  Metabolic pathways
ppx01110  Biosynthesis of secondary metabolites
ppx01240  Biosynthesis of cofactors
ppx02024  Quorum sensing
Module
ppx_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ppx00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    T1E_3517 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    T1E_3517 (ribD)
Enzymes [BR:ppx01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     T1E_3517 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     T1E_3517 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Phage_Gp84
Other DBs
NCBI-ProteinID: AFO49353
UniProt: I7BCR4
LinkDB
Position
3862315..3863445
AA seq 376 aa
MPSQAAILDAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVH
ALRQAGELARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRR
LAEAGIEVASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGP
AARSAVQRLRARSSVVLTSAASVLTDNARMTVRGAELGLDAETTALALSRTPLRVLVDGR
LRLPLAAPFFQAGPALVVTAVADDPRYAAAGHELLSLPGDNGQVDLAALLRALAARGVNE
ILLEAGAGLVGAFARQGLVDEYQLFVAGTFLGSQARPLLDWPMDKMSEAPRLKITEMRAV
GDDWRVTAIPLPAPGV
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgcccagccaagctgccattctcgacgctcactacatggcccgcgcgctggagctggcg
cgtaaaggcctgtacaccacccacccgaacccgcgcgtaggctgcgtgatcgtgcgcgat
ggcgaagtggtcggtgaaggctggcacgtgcgcgccggcgagccccatgccgaagtgcat
gctctgcgccaggccggtgaacttgcccgcggtgcttgtgcctacgtcaccctggaacca
tgcagccaccatggccgtacgccaccgtgtgccgaagcactggtcaaggccggcgtggcg
cgcgtagtagccgccatgcaggaccctaacccacaagtggcggggcagggcctgcggcgc
ctggccgaagccggaatcgaagtggccagcggagtgctcgaagccgaggcccgcgccctc
aacccaggcttcctcaagcgcatggagcacggcctgccgttcgttcgcgccaagctggcc
atgagcctggatggccgcactgccatggccagtggtgaaagccagtggatcaccgggccg
gccgcgcgctcagccgtgcagcgcttgcgcgcccgctccagcgtggtgctgaccagcgcc
gccagcgtgctgacagacaacgcacgcatgaccgtgcgtggcgccgagctgggcctggat
gccgaaacaaccgccctggcactcagccgcacacccttgcgggtgctggtcgatggccgc
ctgcgcctgccactggcggcgccgttcttccaggcgggcccagcgctggtggtgacggct
gtcgcagatgacccgcgctatgccgctgccggccacgaattgctcagcttgccgggcgac
aatggccaggtcgacctggcggcgctgcttcgcgccctggctgcccgcggcgtcaacgaa
atcctgctggaagccggtgccggcctggtcggtgccttcgctcggcaaggcctggtcgac
gagtaccagctgttcgtcgctggcaccttcctgggctctcaggcccggccactgctggac
tggccgatggacaagatgagcgaagcaccacggctgaaaattaccgaaatgcgcgcagtg
ggcgatgactggcgggtcacggccatccccctgccagcgcccggcgtataa

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