Pseudomonas putida DOT-T1E: T1E_3547
Help
Entry
T1E_3547 CDS
T02181
Symbol
soxD
Name
(GenBank) sarcosine oxidase delta subunit family protein
KO
K00304
sarcosine oxidase, subunit delta [EC:
1.5.3.24
1.5.3.1
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00260
Glycine, serine and threonine metabolism
ppx01100
Metabolic pathways
Module
ppx_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
T1E_3547 (soxD)
Enzymes [BR:
ppx01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
T1E_3547 (soxD)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
T1E_3547 (soxD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SoxD
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AFO49383
UniProt:
I7BCT9
LinkDB
All DBs
Position
complement(3894046..3894381)
Genome browser
AA seq
111 aa
AA seq
DB search
MLHIFCPHCGELRSEEEFHASGQAHIARPLDPNACSDEEWGTYMFYRDNPRGIHHELWDH
VAGCRQYFNVTRDTVTYEILETYKIGEKPQVTANGKAASATSTVKGQGEKV
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatattttctgtccccactgcggcgagctgcgctccgaagaagagttccacgcc
tctggccaggcacacatcgcccgcccgctggaccctaacgcctgctccgacgaggagtgg
ggtacctacatgttctaccgtgacaacccacgcggtattcaccatgaactgtgggaccac
gttgccggctgccgccagtacttcaacgtcacccgtgacaccgtgacctacgaaattctg
gaaacctacaagattggcgagaagccgcaagtgaccgccaatggcaaagccgccagcgcc
acgtcgaccgtcaaaggccaaggggaaaaagtatga
DBGET
integrated database retrieval system
