Pseudomonas putida DOT-T1E: T1E_3549
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Entry
T1E_3549 CDS
T02181
Symbol
glyA-1
Name
(GenBank) Serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00260
Glycine, serine and threonine metabolism
ppx00460
Cyanoamino acid metabolism
ppx00630
Glyoxylate and dicarboxylate metabolism
ppx00670
One carbon pool by folate
ppx00680
Methane metabolism
ppx01100
Metabolic pathways
ppx01110
Biosynthesis of secondary metabolites
ppx01120
Microbial metabolism in diverse environments
ppx01200
Carbon metabolism
ppx01230
Biosynthesis of amino acids
ppx01240
Biosynthesis of cofactors
ppx04981
Folate transport and metabolism
Module
ppx_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
T1E_3549 (glyA-1)
09102 Energy metabolism
00680 Methane metabolism
T1E_3549 (glyA-1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
T1E_3549 (glyA-1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
T1E_3549 (glyA-1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
T1E_3549 (glyA-1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
T1E_3549 (glyA-1)
Enzymes [BR:
ppx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
T1E_3549 (glyA-1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AFO49385
UniProt:
I7B2W1
LinkDB
All DBs
Position
complement(3895662..3896915)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANGAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKAYQQQVIENAQAMAQ
VFIDRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCVALAGWICDILDNLGDADVEADVAKNVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaagaacagcgccaggaagatcacatcgagctgatcgcctcggagaactacaccagc
aagcgcgtcatgcaggcccaaggcagcggcctgaccaacaagtacgctgaaggctaccct
ggcaagcgttactacggtggctgcgagcacgtagacaaggtagaagccctggccatcgag
cgcgccaagcagctgttcggtgccgactacgcaaacgtccagccacactccggctcgtcg
gccaacggcgccgtctacctggccctgctgcaagccggtgacaccatcctgggcatgagc
ctggcccacggtggccacctgacccacggcgccaaagtgtcgtcctcgggcaagctgtac
aacgctgtccagtacggcatcgacaccaacaccggcctgatcgactatgacgaagtcgag
cgcctggcggtcgagcacaagccgaaaatgatcgttgccggtttctcggcctactccaag
accctcgacttcccacgcttccgcgccatcgccgacaaagtgggcgcactgctgttcgtc
gacatggcccacgttgccggcctggttgccgctggcctgtacccgaacccgatcccgttc
gccgatgtggtcaccaccaccacccacaagaccctgcgcggtccgcgtggcggcctgatc
ctggccaagtcgaacgaagagatcgagaaaaagctgaacgccgctgtattcccgggtgcc
cagggtggcccgctgatgcacgtgatcgctgccaaggcggtgtgcttcaaggaagcgctg
gagcccggattcaaggcctaccagcagcaagtgatcgaaaacgcccaggccatggcccag
gtgttcatcgaccgtggctacgatgtggtttccggtggcaccgacaaccacctgttcctg
gtcagcctgatccgtcagggcctgactggcaaagacgccgacgccgccctgggtcgtgcg
catatcaccgtcaacaagaacgccgtgccgaacgacccgcagtcgccgttcgtcacgtcg
ggcctgcgtatcggcaccccggccgtcaccacccgcggcttcaaggtcgctcagtgtgtg
gcattggctggctggatttgcgacatcctcgacaacctcggtgacgcagacgtcgaagcc
gatgtggcgaagaacgtcgcggccctgtgcgcagatttccctgtctaccgctga
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