Pseudomonas putida DOT-T1E: T1E_3574
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Entry
T1E_3574 CDS
T02181
Name
(GenBank) SMC domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppx03400
]
T1E_3574
DNA repair and recombination proteins [BR:
ppx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
T1E_3574
Archaeal homologous recombinant proteins
T1E_3574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_21
AAA_29
ABC_tran
nSTAND3
RsgA_GTPase
MMR_HSR1
AAA_22
cobW
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AFO49410
UniProt:
I7B2Z0
LinkDB
All DBs
Position
complement(3922554..3926198)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPIDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR
LNAIGREAKVPDADGDIPTSDPRNLLRRGTGSGFAEVDFVGIDGRRYRARWEANRARDKA
NGKLQHSRQSFYDLDSEQVLGSGKNEYKQLVEARLGLNFEQFTRAVMLAQSEFGAFLKAD
DKDRSELLEKLTNTAIYTRLGQRAFSKAREAGEAHNALKERASHLLPMAAEARTELDQRL
EQAQQQFKADQAGERQLEQQRNWLNEQRQLQAQHTEASTTLQAAELDWQQLAEPRLDLAR
LERLAPERHQFHRRQALSAQLAPVAAKMAEQQQQQAELQVRTRELEQALDTARQALADRQ
AEHSENAPRLRQAFAAQDSLARLDQELAAQRSISQQAQQQVADGQQQLQQLEDNQQRSVQ
QLAQIDTALADSQHLAGLANAWHAYLPQLKQVMLIGGRLTKGREELPGLQAQASQANAHL
QAERDAYDLLFREAKAEPQALAEQIDLLGGMLQDNRKQQRAVEEMSRLHGREQELRQQLD
ALRERQQQAMLQRQQLITEGTAAKAELEAAEQALILTRQLLERQRLARNTSVEELRDQLR
DGEPCPVCGSAEHPFHQPEALLQSLGRHDQAEEHAAQKQVETLNNKLVELRTQLGVVNAQ
LKDFQQQQQQLGEQLQPLVAQVQAHSLWPALAPQDDKARSTWLDSQLRRLDEEISQDEKR
QSALLALQKDAARLNQQLQAAHDAQQQAQRHLEQQHQALANDEQLLQQGLNDLAGVLPEE
ALKALNEDPANAFLALDQQIAQRLQQLEQRKDEQEEQQARQAQLDKLRDQQQARVQGLQQ
LQHTLAALDEQRQQAQTSLGELLGEHASAEAWQQHMEATLEQARALDADTAQRLQDLRTQ
GVQLASELKANTQQQQALDAECQQLQAQIAQWRSEHPELDDAGLDRLLAMDDAQVNELRQ
RLQGAEKAIEQGRVLLQEREQRLQQHAAQMTVDTSAEALEHALTELRGRLVNHEQQCAEL
RAQQADDQRRQQAHQALAAEIEQAHQQWQRWARLNALIGSASGDVFRKIAQGYNLDLLLH
HANAQLRQLARRYRLKRGGSALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSDVEVCG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccatccgcctgaagaacctggcatcgctggccggcccgatcgacatc
gatttcaccgcagaaccgttggccagcgctggcctgttcgccatcaccgggcctaccggt
gcgggcaagagcaccttgcttgacgccctgtgcctggcgctgttcggcaccgtgccgcgc
ctcaatgccattggccgtgaggccaaggtgccggacgccgacggcgacatccccacctcc
gacccgcgcaacctgctgcgccgtggcaccggcagcgggtttgccgaggtcgatttcgtc
ggcatcgacggccgccgctaccgcgcccgctgggaagccaaccgcgcccgcgacaaggcc
aacggcaaactgcagcacagccgtcaaagcttctacgacctcgacagcgagcaagtgctc
ggcagtggcaagaacgaatacaagcaactggtcgaagcccgtctgggcctgaacttcgaa
cagttcacccgtgcggtgatgctggcccagagcgagttcggcgcgttcctcaaggccgac
gacaaagaccgtagcgagttgctggaaaagctcaccaacaccgcgatctacacccgcctg
ggccagcgtgccttcagcaaggcgcgcgaagccggcgaggcgcacaacgccctgaaagaa
cgcgccagccatctactgccgatggctgccgaggcccgtaccgagctcgaccagcgcctg
gagcaggcgcagcagcagttcaaggccgaccaggccggcgagcgccagctggagcagcaa
cgcaactggctgaatgagcaacgccagctacaggcccaacacaccgaagccagcaccacg
ctgcaggccgccgaactggactggcaacagctggccgaaccacgcctggacctggcacgc
ctggagcgcctggccccagagcgtcaccagttccaccgccgacaggccctgagcgcacag
ctggcgccagtggccgcgaaaatggccgaacagcaacagcagcaagccgaactgcaggtg
cgcacccgcgagctcgaacaggcgctggacactgcgcgccaagcgcttgccgaccgccag
gccgagcacagcgagaacgcgccgcgcctgcgccaggcctttgccgcccaggacagtctg
gcacgcctggaccaggagctggccgcccagcgcagcatcagccaacaggcgcaacaacag
gtcgctgacggccagcagcaactgcagcagctggaagacaaccagcagcgcagcgtgcag
caactggcgcagatcgacaccgcgcttgccgacagccagcacctggcgggcctggccaat
gcctggcacgcctacctgccgcaactgaaacaggtgatgctgatcggtggccgcctgacc
aagggccgagaagagctacccggcttgcaggcccaggccagccaggccaatgcgcacctg
caggccgagcgcgatgcctacgacctgttgttccgtgaagccaaggccgaaccccaggcc
ctggccgaacagatcgacctgctcggcggcatgctgcaggacaaccgcaaacagcagcgc
gccgtagaagaaatgtcacgcctgcacggccgtgaacaggagctgcgccagcagctggat
gccctgcgcgaacggcagcagcaggccatgctgcaacgccagcaactgattaccgaaggc
accgccgccaaggccgagctggaggccgccgagcaggcgttgatcctcacccgtcaactg
ctggaacggcaacgcctggcacgcaacaccagcgtcgaagaactgcgtgaccaactgcgt
gacggcgaaccctgcccggtctgtggcagcgccgaacaccccttccatcagccagaagcg
ctgctgcagagcctgggtcgccatgaccaggccgaagagcacgctgcgcagaagcaggtc
gaaacgctcaacaacaagctggtggagctgcgtacccagctgggtgtggtcaatgcccag
ctcaaggactttcagcagcaacagcagcaactgggcgaacagttgcaaccgctggtggct
caggtacaggcacacagcctatggccagccctcgccccgcaggacgacaaggcccgtagc
acctggctcgacagccagctgcgtcgcctggatgaagaaatcagccaggacgagaaacgc
cagagcgccctgctggccctgcaaaaagacgccgcccgcctgaaccagcaattgcaggcg
gcccacgacgcccagcaacaggcccaacgccatctggagcaacagcaccaggccctggcc
aacgacgaacagctgttgcagcaaggcctgaacgacctggccggcgtactgccagaggaa
gcgctcaaggccctcaacgaagacccggccaatgccttcctcgccctcgaccagcagatt
gcccagcgcctgcagcaactggaacagcgcaaggacgaacaggaagaacagcaagcccga
caagcccagctggacaaactgcgcgatcagcaacaggcgcgcgtgcaaggcctgcaacag
ttgcaacacacgctcgcggccctcgacgaacagcgccagcaggcccagacgtcgctcggc
gagctgctaggcgaacatgccagtgccgaagcctggcagcagcatatggaagccacgctg
gaacaagcccgcgccctcgatgccgacaccgcccagcgcctgcaagatctgcgcacccaa
ggcgtgcaactggccagcgagctcaaggccaatacccagcaacaacaggcactggatgcc
gaatgccaacagttgcaggcccagatcgcccagtggcgcagcgagcatccggaactggac
gatgccggcctcgatcgcctgctggccatggatgacgcgcaagtcaatgaattgcgccag
cgtttgcaaggcgcggaaaaagccatcgagcagggccgcgtgctgctgcaggaacgtgag
cagcgcctgcaacaacacgccgcacaaatgaccgtggacacctcggccgaagccttggaa
cacgccctgaccgagctgcgcgggcggctggtcaaccatgagcagcaatgcgccgaattg
cgtgcacaacaggccgacgatcagcgccggcagcaggcccaccaggcgctggcggcagaa
atcgaacaggcccaccagcagtggcaacgctgggcccgcctcaatgccctgatcggttcg
gcctccggtgatgtgttccgcaagatcgcccaaggctacaaccttgatctgctgctgcac
cacgccaacgcccagctacgtcagctggcccgtcgctaccgcctcaagcgcggcggcagc
gcccttggcctgctggtgctggacaccgagatgggcgacgaactgcgttcggtgcactcg
ttgtcgggcggggaaaccttcctggtgtcgctggccctggcgctgggcctggcgtcgatg
gcgtccagcaccttgcgtatcgagtcgctgttcatcgacgaaggcttcggcagcctcgac
cccgagtcgctgcaactggcaatggacgccctcgacggcttgcaagcccagggccgcaaa
gtggcggtgatttcccacgtacaggaaatgcacgagcgcatcccggtgcagatccaggtg
cggcgccagggtaatggcctcagtgacgtggaggtgtgcgggtga
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integrated database retrieval system
