KEGG   Pseudomonas putida DOT-T1E: T1E_3699
Entry
T1E_3699          CDS       T02181                                 
Name
(GenBank) DNA-binding protein Fis
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
ppx  Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:ppx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppx03000]
    T1E_3699
   03036 Chromosome and associated proteins [BR:ppx03036]
    T1E_3699
   03400 DNA repair and recombination proteins [BR:ppx03400]
    T1E_3699
Transcription factors [BR:ppx03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    T1E_3699
Chromosome and associated proteins [BR:ppx03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    T1E_3699
DNA repair and recombination proteins [BR:ppx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      T1E_3699
SSDB
Motif
Pfam: Fis_N HTH_8
Other DBs
NCBI-ProteinID: AFO49532
LinkDB
Position
4058345..4058623
AA seq 92 aa
MSDNANLKQHLNTPSEEGQTLRDSVEKALHNYFAHLEGATVTDVYNLVLSEVEAPLLESV
MNYVKGNQTKASEMLGLNRGTLRKKLKQYDLL
NT seq 279 nt   +upstreamnt  +downstreamnt
gtgagcgacaacgccaacctgaaacagcacctcaacacgccgagcgaagagggccagacc
cttcgcgacagcgtcgagaaggcgctgcacaactacttcgcccacctggaaggcgcgacc
gtgacggacgtgtacaacctggtgctctccgaagtcgaggcgcccctgctcgaaagcgtg
atgaactacgtgaagggcaaccagaccaaggccagcgagatgctcgggctgaaccgaggc
accctgcgcaagaagctcaagcagtacgacttgttgtaa

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