Pseudomonas putida DOT-T1E: T1E_3699
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Entry
T1E_3699 CDS
T02181
Name
(GenBank) DNA-binding protein Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppx03000
]
T1E_3699
03036 Chromosome and associated proteins [BR:
ppx03036
]
T1E_3699
03400 DNA repair and recombination proteins [BR:
ppx03400
]
T1E_3699
Transcription factors [BR:
ppx03000
]
Prokaryotic type
Helix-turn-helix
Other families
T1E_3699
Chromosome and associated proteins [BR:
ppx03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
T1E_3699
DNA repair and recombination proteins [BR:
ppx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
T1E_3699
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
Motif
Other DBs
NCBI-ProteinID:
AFO49532
LinkDB
All DBs
Position
4058345..4058623
Genome browser
AA seq
92 aa
AA seq
DB search
MSDNANLKQHLNTPSEEGQTLRDSVEKALHNYFAHLEGATVTDVYNLVLSEVEAPLLESV
MNYVKGNQTKASEMLGLNRGTLRKKLKQYDLL
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaacgccaacctgaaacagcacctcaacacgccgagcgaagagggccagacc
cttcgcgacagcgtcgagaaggcgctgcacaactacttcgcccacctggaaggcgcgacc
gtgacggacgtgtacaacctggtgctctccgaagtcgaggcgcccctgctcgaaagcgtg
atgaactacgtgaagggcaaccagaccaaggccagcgagatgctcgggctgaaccgaggc
accctgcgcaagaagctcaagcagtacgacttgttgtaa
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