Pseudomonas putida DOT-T1E: T1E_4064
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Entry
T1E_4064 CDS
T02181
Name
(GenBank) RNA-binding S4 domain-containing protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppx03009
]
T1E_4064
Enzymes [BR:
ppx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
T1E_4064
Ribosome biogenesis [BR:
ppx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
T1E_4064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AFO49893
UniProt:
I7BDZ8
LinkDB
All DBs
Position
complement(4443537..4444604)
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AA seq
355 aa
AA seq
DB search
MSEQDLKETEITPPSGEKLQKVLARIGVGSRRDVEAWISQGRIKVNGVEATLGQRVDLHD
AIAVDGKLIKREEAAEATRRVIMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGR
LDINTTGLLLFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDGPAK
FTDIQKAPGGEGFNHWYHCVVMEGRNREVRRLWESQGMVVSRLKRVRFGPVFLNSDLPMG
RWREMTQGEIDILAAEVGLQPVALPAMKLKAKDKMERLQRKSTRPLGRGERVRNLRPAHE
GAATGERPARQPREEAPRKPTRGSTVAERPSEMRKRPGKPDGDKPAGRGRGKPRG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcaagacctgaaagaaaccgaaatcaccccgccatccggcgaaaagctgcag
aaagtgctggcgcgcattggcgtgggctcgcggcgtgatgtcgaggcctggatcagccag
ggtcgcatcaaggtcaacggcgtcgaggccacccttggccagcgcgtcgacctgcacgac
gccatcgccgtcgacggcaagctgatcaagcgcgaggaggccgccgaggccacccgccgg
gtgatcatgtacaacaagcccgacggcgaaatctgcacccgtgacgacccggaagggcgc
ccgaccgtgtttgaccgtttgccacggccaaaagaaggccgttggatcaacatcggccgc
ctcgacatcaacaccactggcttgctgctgttcaccaccgacggtgagctggccaaccgc
ctgatgcacccgtcctacgagatggaccgcgagtacgcggtacgtgtgcgcggtgaagtc
gacgacgagatgatcgagcgcctgaaagccggcgtaatgctggaagacggcccggccaag
ttcaccgatatccagaaggcaccgggtggcgaaggcttcaaccactggtaccactgcgtg
gtgatggaaggtcgtaaccgtgaggtgcgtcgcctgtgggaatcccagggcatggtggtc
agccgcctgaagcgtgtgcgtttcggcccggtgttcctcaattcggacctgccgatgggc
cgctggcgcgaaatgacccagggcgaaatcgacatcctcgccgccgaagtgggcctgcag
ccggtcgcgctgccagccatgaagctcaaggccaaggacaagatggagcgcctgcagcgc
aagtcgacccgcccgctgggccgtggcgagcgcgtgcgcaacctgcgcccggcccacgaa
ggtgccgctactggcgaacgccctgcgcgtcagccgcgtgaagaagcgccgcgtaaaccc
acccgtggcagcacggtggctgagcgcccgagcgagatgcgcaagcgtccgggcaagcct
gatggcgacaagccggcaggccgtggtcgcggcaagccgcgtggctga
DBGET
integrated database retrieval system
