Pseudomonas putida DOT-T1E: T1E_4354
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Entry
T1E_4354 CDS
T02181
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00470
D-Amino acid metabolism
ppx00550
Peptidoglycan biosynthesis
ppx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
T1E_4354 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T1E_4354 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppx01011
]
T1E_4354 (murD)
Enzymes [BR:
ppx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
T1E_4354 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppx01011
]
Precursor biosynthesis
Amino acid ligase
T1E_4354 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AFO50183
UniProt:
I7BER4
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All DBs
Position
4734481..4735821
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AA seq
446 aa
AA seq
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MIASDQFRIVVGLGKSGMSLVRFLASRGIAFAVADTREQPPELETLRRDYPQVEVRCGEL
DVDFLCRANELYVSPGLALATPALQQAAARGVKLSGDIELFARHAKAPIIAISGSNAKST
VTTLVGEMAAKAGKRVAVGGNLGTPALDLLADDIELYVLELSSFQLETTDQLNAEVATVL
NISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLPVEGRPCWTFGLNSPDFK
AFGLREVDGEKYLAFEFQTLMPARELKVRGAHNQSNALAALALGHAAGLPFEPMLAALRE
FGGLAHRCQWVRERNGVNWYDDSKATNVGAALAAIEGLGADIEGKLVLIAGGDGKGAEFT
ALREPVKRFCRAVVLLGRDAERLAEALGDAVPLVRVKTLDDAVQQCAELAQAGDAVLLSP
ACASLDMFKNFEERGRLFAQAAGGLA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgcttccgaccaattccgcatcgttgtcggcctcggcaagagcggcatgtccctg
gttcgcttcctggcgagccggggcattgcctttgcggtcgccgatacccgcgagcaaccg
ccggaactggaaaccctgcgccgtgattacccgcaggtggaagtgcgctgtggtgaactg
gacgtggacttcctgtgccgcgccaacgagttgtacgtgagccccggtctggccttggcc
acgccggccttgcagcaggcggccgcgcgtggcgtgaagctgtctggcgacatagagctg
tttgctcgccatgccaaggcgccgatcattgccatcagcggttccaacgccaagagcacc
gtcacgacgctggtcggtgaaatggccgccaaggccggcaagcgagtggccgtgggcggt
aacctcggtaccccggcgctcgacctgctggccgatgacatcgagttgtacgtgctggag
ctttccagcttccagctggaaaccactgaccagctcaacgccgaagtggcgactgttctg
aacatcagcgaagaccacatggaccgctatagcggccttccggcctaccacctggccaag
caccggattttccgcggtgcccgccaggtggtggtcaaccgccaggacgccctgagtcgg
ccgctgccggtggaaggccgaccatgctggaccttcggcctcaactcgcccgacttcaaa
gcgtttggcctgcgtgaagtggacggtgaaaaatacctggcgttcgagttccagacgctg
atgccggcgcgtgaactgaaggttcgcggtgctcacaaccagagcaacgccctggcggcg
ctggccctggggcatgctgccggcctgccgttcgagcccatgctcgcggccctgcgcgag
ttcggtggcctggcccaccggtgccagtgggtacgcgagcgtaatggcgtgaactggtac
gacgattccaaggccaccaacgtcggtgctgccctggccgccatcgaaggcctgggcgcc
gatatcgaaggcaagttggtgctgatcgccggtggtgacggcaaaggtgctgaattcact
gcgctgcgcgagccggtcaagcgtttctgccgcgccgtggtattgctcggccgtgatgcc
gagcgcctggccgaggccttgggcgatgccgtgccactggttcgggtcaagacgcttgac
gatgccgtacagcagtgtgccgaactggcccaggccggcgatgccgtgctgctgtcgcca
gcatgcgccagcctcgacatgttcaagaacttcgaggaacgggggcgtctgttcgcccag
gcagcgggaggtcttgcatga
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