Pseudomonas putida DOT-T1E: T1E_4400
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Entry
T1E_4400 CDS
T02181
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00300
Lysine biosynthesis
ppx00470
D-Amino acid metabolism
ppx01100
Metabolic pathways
ppx01110
Biosynthesis of secondary metabolites
ppx01120
Microbial metabolism in diverse environments
ppx01230
Biosynthesis of amino acids
Module
ppx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
T1E_4400
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
T1E_4400
Enzymes [BR:
ppx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
T1E_4400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AFO50229
UniProt:
I7CEC1
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All DBs
Position
complement(4787673..4788920)
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AA seq
415 aa
AA seq
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MNAFNYRDGELFAEGVALSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV
GVRYRDEQPPRVADYIKAIRERVGERDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVSAVKPRAGEGRAYDLVGPICETGDFLGKDRVLNLAEGD
LLAVESAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctttcaactaccgcgacggtgagctgttcgcggaaggcgtggccttgtcggcc
attgctgaacgttacggcacccccacctatgtgtactcgcgtgcccacatcgaggcccag
taccgtagctacgcagacgccctgcaaggcaccgagcacctggtgtgcttcgcggtcaag
gccaactccaaccttggcgtgctgaacgtgctggcgcgcctgggcgcaggctttgacatt
gtctccggtggtgaactggagcgtgtactggccgctggcgggcgtgccgaccgcgtggtg
ttctccggcgttggcaaaacccgtgaagacatgcgccgtgccctggaagttggcgtgcac
tgcttcaacgtcgaatccaccgacgagctggagcgcctgcaagtagtcgccgccgaaatg
ggcaaggttgccccggtgtcgctgcgggtcaacccggacgtcgatgccggtactcacccg
tacatctccaccggccttaaagaaaacaagttcggcatcgccattgccgatgccgaggcc
atctacgtacgcgccgcacagctaccgaacctggaagtggtcggtgtcgactgtcacatc
ggctcgcaactgaccaccgtcgagccattcctcgacgccctcgaccgcctgctggtgctg
gtcgaccgcctggccgagtgcggcatacacctgcgccacctggacctgggtggcggtgtc
ggcgtgcgctaccgcgacgaacagccaccacgggtggccgactacatcaaggccatccgc
gaacgcgtgggcgagcgcgacctggccctggtgttcgagcctggccgctacatcgtcgcc
aacgctggcgtgctgctgacccgcgtggaatacctcaagcacaccgaacacaaggacttc
gcgatcatcgatgcagcgatgaacgacctgatccgcccggccctgtaccaggcctggatg
ggtgtcagcgcggtcaagccacgtgcaggcgaaggccgtgcctatgacctggtcggccct
atctgcgagactggcgacttcctcggcaaggaccgcgtactcaacctggccgaaggtgac
ctgctggccgtagagtccgcgggcgcctatggttttgtcatgagctccaactacaatacc
cgcggccgttgcgctgaaatcctggtcgacggcgaccaggcgttcgaagtacgccgccgc
gagaccgtcgccgaactgtatgctggcgaaagcctgctgccggagtaa
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