Pseudomonas putida DOT-T1E: T1E_4669
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Entry
T1E_4669 CDS
T02181
Symbol
rpoH
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppx03021
]
T1E_4669 (rpoH)
Transcription machinery [BR:
ppx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
T1E_4669 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
AFO50496
UniProt:
I7CBB1
LinkDB
All DBs
Position
complement(5101922..5102776)
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTVEQERDLGERLYYEQDVEAARQMVMAHLR
FVVHIARSYAGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLSGQD
MAFDPAAEADDDSAFQSPAHYLEDHRYDPAVQLEDADWSDNSTSNLHEALQGLDERSRDI
LYQRWLAEEKATLHELADKYSVSAERIRQLEKNAMNKVKALIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatcgttgcaacctgcctatgccctggtacccggtgcaaacctggaagcctat
gtgcacacggtcaacagcatcccgctgctgacggtcgagcaggagcgtgatctgggcgag
cgtctctattatgagcaggatgtcgaggccgctcgtcagatggtgatggcccacctgcgt
ttcgtcgtacatatcgcccgtagttatgccggctacgggttggcccaggctgacctgatc
caggaaggcaatgtcggcctgatgaaagccgtcaagcgcttcaaccctgaaatgggtgtg
cgcctggtgtcgttcgctgtgcactggatcaaggcagagatccacgagttcattctgcgc
aactggcgcatcgtcaaagtggctaccaccaaggctcagcgcaagctgttcttcaacctg
cgtagccagaagaagcgcctggcgtggctgaacaacgacgaagtgcatcgcgtggcggaa
agccttggcgtcgagccgcgcgaagtgcgcgagatggaaagccgcctcagcggccaggac
atggctttcgatccggcagcggaagctgacgacgacagcgccttccagtcgcctgcgcat
tacctggaagaccaccgttacgatccggcggtgcagttggaggatgccgactggagtgac
aattccaccagcaacctgcacgaagcgctgcaaggtctggacgagcgtagccgcgacatt
ctctatcagcgttggctggcggaagagaaggccacgctgcatgaactggcagacaagtac
agcgtatcggctgagcgtattcgccagctggagaagaatgcgatgaacaaggtcaaggca
ctgatcgctgcctga
DBGET
integrated database retrieval system
