Pseudomonas putida DOT-T1E: T1E_4707
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Entry
T1E_4707 CDS
T02181
Symbol
exoAA
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T1E_4707 (exoAA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppx03400
]
T1E_4707 (exoAA)
Enzymes [BR:
ppx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
T1E_4707 (exoAA)
DNA repair and recombination proteins [BR:
ppx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
T1E_4707 (exoAA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
AFO50534
UniProt:
I7CF72
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All DBs
Position
5146339..5147130
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AA seq
263 aa
AA seq
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MGPFMRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLY
ACDAEVPAQGGVALYSRMQPKAVITGLGFETADRYGRYLQADFDKVSIASLLLPSGMNGD
EDLNQKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLAPERA
WMDAITGEMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFVRNAR
LPRQPRFSQHAPLIVDYDWTLTI
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggggccatttatgcggatcatcagtgtgaacgtaaatggcattcaggctgcggccgag
cgtggtttgctcagctggctgcaagcccagaatgccgacgtcatctgccttcaggatacc
cgcgcctcggcctttgaactcgacgacccagctttccagctcgatggctatttcctttat
gcctgcgacgcggaggtgcctgcccaaggtggtgtggccctttactcgcgcatgcagccc
aaggcagtcatcaccggcctgggcttcgagacagccgaccgctacgggcgttacctgcaa
gcagatttcgacaaagtcagtattgccagcctgctgctgccttcgggcatgaacggcgac
gaagacttgaaccagaagttcaagttgatggacgacttcgccaagtacctggacaagcag
cgtcgcaagcgtcgcgaatacatctattgcggctcgttctacgtggcgcagcagaagctc
gacatcaaaaactggcgtgacagccagcagtcgccaggcttcctggcgccagaacgcgcc
tggatggatgcaatcactggcgagatggggtatgtcgatgccttgcgcgaagtcagccgt
gaaggcgaccagtacagctggtggccagacaacgagcaggccgagatgcttaacctgggc
taccggttcgactaccagattctcaccccgggcctgcgccgcttcgtacgcaacgctcgc
ctgccgcgtcagccacgcttctcccagcatgcgccgctgatcgtcgactatgactggacg
ctgaccatctaa
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