Pseudomonas putida DOT-T1E: T1E_4757
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Entry
T1E_4757 CDS
T02181
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx03030
DNA replication
ppx03410
Base excision repair
ppx03420
Nucleotide excision repair
ppx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T1E_4757 (polA)
03410 Base excision repair
T1E_4757 (polA)
03420 Nucleotide excision repair
T1E_4757 (polA)
03440 Homologous recombination
T1E_4757 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppx03032
]
T1E_4757 (polA)
03400 DNA repair and recombination proteins [BR:
ppx03400
]
T1E_4757 (polA)
Enzymes [BR:
ppx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T1E_4757 (polA)
DNA replication proteins [BR:
ppx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
T1E_4757 (polA)
DNA repair and recombination proteins [BR:
ppx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
T1E_4757 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T1E_4757 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
AFO50584
UniProt:
I7CFC0
LinkDB
All DBs
Position
complement(5196373..5199120)
Genome browser
AA seq
915 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFD
AKGGTFRDAMFAEYKANRPSMPDDLRVQIEPLHASVKALGYPLLCVEGVEADDVIGTLAR
SSAALGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALM
GDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPTLAIRGAKTLPAKLEEHRDA
AFLSYELATIKVDVPLDVEVEALVCGEPDREALLALYTEMEFKSWVAEVQRDAAKAGDDV
APAVEPAAKVEPKYETILDQARFDAWLEKLRQAPLFAFDTETTGLDAQQAQLVGLSFAVE
PHEAAYVPLAHDYEGAPVQLDREAVLLALKPLLEDPAKAKVGQNAKYDINILANGSPAIE
MRGVAYDTMLESYVLNSTATRHDMDSLAQKYLDHTTIAFEDIAGKGAKQLTFNQIILDKA
GPYAAEDADITLRLHHALQARLAQTPSVQPVLTDIEMPLVPVLARIERQGALVDAELLKV
QSGELGVKMAELELRAYELAGETFNLGSPKQLGTILYDKLGMPVLSKTAKGQPSTAEAVL
DELAEQGYPLPEVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAATGRLSSSD
PNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLAKDEGLLHAFRNDLDV
HRATAAEVFGVALEDVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQDYIDRYFA
RYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAPMQGTAA
DIIKRAMVKVDNWLSESGLDARVILQVHDELVLEVREDLVEQVKDEIRQHMSQAAQLDVP
LLVEAGVGANWDEAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgcccctcgtcctggtggacggttcctcctacctttatcgcgccttccac
gcgctgccaccgctgaccacgtccaagggcatgccgaccggtgcggtgaagggtgtgctg
aacatgctcaagagcctgcgcaagcaatatcccgacagcctgtttgccgtggtgttcgac
gccaagggcggcactttccgcgatgccatgttcgccgagtacaaggctaaccgccccagc
atgccggatgacctgcgggtacagatcgagccgctgcacgccagcgtcaaggcgttgggc
tacccgctgctgtgcgtggagggtgtcgaggctgacgacgtgatcggcaccttggcgcgc
agcagcgccgccctgggtcgcccggtgatcatctcgaccggtgacaaggacatggcgcaa
ctggtggacgggcacattaccttggtcaacaccatgaccggaagcgtgctggacgtggct
ggcgtgcacgagaagttcggcgtcggcccggaacacatcatcgacttcttggccctgatg
ggtgacaaggtcgacaacatcccgggtgtgccgggcgtgggcgaaaaaacggcagtgggg
ctgctgaccggcatcggcggcggtctcagcgacctttacgccaacctggacaaggtgcca
acgctggccattcgcggcgccaagaccttgccggccaaactggaggagcaccgcgacgcg
gctttcctgtcctacgagctggccaccatcaaggttgacgtgccgctggatgtcgaggtc
gaggcgctggtgtgcggtgaacctgaccgcgaggcgttgctggcgttgtacaccgagatg
gagttcaagagctgggtcgccgaagtgcagcgcgatgcggccaaggctggtgatgatgtc
gctccggctgtggagcctgcggccaaggtcgagcccaaatacgaaaccatcctcgaccag
gcccgtttcgacgcctggctggaaaagctgcgccaggcaccgctgttcgccttcgacacc
gagaccaccggcctggacgcccagcaggcgcagttggtcggcctgtccttcgctgtcgag
ccgcatgaagcggcctatgtgccgctggcccacgattatgaaggcgcgccggtccagctg
gaccgcgaggccgtgctgttggcgctgaaaccactgctggaggacccggccaaggccaag
gtcgggcagaacgccaagtacgacatcaacatcctcgccaatggctcccccgctatcgag
atgcgcggcgtggcctacgacaccatgctcgagtcgtacgtgctgaactccaccgccacc
cgtcatgacatggacagcctggcgcagaagtacctcgaccacaccacgatcgccttcgag
gacatcgccggcaagggtgccaagcagcttaccttcaaccagatcatcctggacaaggcc
ggcccgtacgccgccgaagacgccgacatcacgctgcgcctgcaccatgcattgcaggcc
cgcctggcacagacgccgagcgtgcaaccggtgctgacggatatcgagatgccgctggtg
ccggtgctggccaggatcgagcgccagggtgcgctggtcgatgccgagctgttgaaagta
cagagcggtgagctgggcgtgaagatggctgagcttgagctgcgtgcctacgagctcgcc
ggtgagacgttcaacctcggctcgcccaagcagctgggcacgatcctttacgacaagctg
ggcatgccggtgttgagcaagaccgccaagggccagccatccaccgccgaagcagtgctc
gacgaactggccgaacaaggctacccgctgccagaggtgctgatgcagtaccgcagcctg
agcaagctcaagagcacctacaccgacaagttaccggggcagatcaacccgcgcaccggg
cgtatccacacgtcctaccagcaggccgtggcggccaccggccggttgtcgtcgagcgac
ccgaacctgcagaacattccgatccgcaccgctgaagggcggcgtattcgccaggcgttc
atcgccagtccgggttacaagcttctggcggcggactattcacagatcgagctgcgcatc
atggcccacctggccaaggacgaaggcttgctgcatgccttccgcaatgacctggacgtg
caccgcgccacggcagccgaagtgttcggtgtggctctggaagacgtgaccaccgaccag
cgccgcagcgccaaggcgatcaacttcggcctgatatacggcatgagcgcctttggcctg
gccaagcagatcggcgtcgaccgcaagcagtcacaggactacatcgaccgttattttgcc
cgctacccgggcgtgctggcctatatggagcgcacccgcgcccaggcggccgagcaaggc
tttgtcgaaaccctgtttggccgccggctgtacttgccagacatcaatgccaagaaccct
gccctgcgcaagggcgccgagcgcacggcgatcaacgccccgatgcagggtactgcggcc
gacatcatcaagcgggccatggtcaaagtagataactggttgagcgagagcgggctggat
gcccgggtgatccttcaggtgcacgacgaactggtgcttgaggtacgcgaggacctggtg
gagcaggtgaaagatgaaattcgccagcacatgagccaggccgcgcagctggatgtgccg
ctgcttgtcgaagcaggcgttggtgcgaattgggacgaagctcactga
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