Pseudomonas putida DOT-T1E: T1E_5067
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Entry
T1E_5067 CDS
T02181
Name
(GenBank) UPF0042 nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppx03019
]
T1E_5067
Messenger RNA biogenesis [BR:
ppx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
T1E_5067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_29
SKI
mTERF
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFO50891
UniProt:
I7CCA0
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All DBs
Position
5509996..5510850
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AA seq
284 aa
AA seq
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MRLIIVSGRSGSGKSTALDVLEDSGFYCIDNLPAGLLPQLAENALINTELLQPKVAVSID
ARNLPSHLMRFPELLEEARARHIQCDVLYLDADEEVLLKRFSETRRRHPLTNANRSLAEA
IRVESDLLGPIADLADLKIDTTNLNLYQLRDSIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELREHSGLDQPVIDYLAAQPDVEDMYNDISSYLLKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYITERLGQQLQQTLKNVQVRHRDL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatcatcgtcagcggccggtccggctccggcaagagcaccgccctcgatgtc
ctggaagacagcggtttctattgcatcgacaatctgccagccgggctattgccgcagttg
gcggaaaatgcactgatcaacaccgaattgctgcagcccaaggtggcggtttcgatcgac
gcacgcaacctgcccagccacctgatgcgttttcccgagctgcttgaagaagcccgcgca
cggcacatccagtgcgacgtgttgtacctggatgccgatgaagaggtccttctcaagcgt
ttctcggaaacccgcaggcggcaccccctgaccaacgccaaccgctcgctcgcggaagcg
atccgcgtggaaagcgatttgttgggccccattgccgacctggccgacctgaagatcgac
accaccaacctgaacctgtaccagttgcgtgactcgatcaaactgcgcctgctcaaccaa
cccgagcctggcacagcgtttctggtcgagtcgttcgggttcaaacggggcatgccggtc
gacgccgacctggtttttgacgtgcgctgcctgcccaacccctactggaaaccagaactg
cgtgagcactcaggtctcgatcaacccgtgatcgactacctggccgcacaaccggatgtc
gaagacatgtacaacgacatctccagctacctgctcaaatggttgccccgcttcgctgcc
agcaaccgcgcctacgtaaccattgccatcggctgcactggcggccatcaccgttcggtg
tacatcaccgagcgccttggtcaacagctgcagcaaaccctgaaaaacgtccaggtccgt
catcgcgacctctag
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