Pseudomonas putida DOT-T1E: T1E_5186
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Entry
T1E_5186 CDS
T02181
Symbol
yngG
Name
(GenBank) 3-hydroxy-3-methylglutaryl-CoA lyase, putative
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00280
Valine, leucine and isoleucine degradation
ppx00650
Butanoate metabolism
ppx00907
Pinene, camphor and geraniol degradation
ppx01100
Metabolic pathways
ppx01120
Microbial metabolism in diverse environments
ppx04146
Peroxisome
Module
ppx_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
T1E_5186 (yngG)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
T1E_5186 (yngG)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
T1E_5186 (yngG)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
T1E_5186 (yngG)
Enzymes [BR:
ppx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
T1E_5186 (yngG)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AFO51007
UniProt:
I7C3L2
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All DBs
Position
complement(5641287..5642216)
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AA seq
309 aa
AA seq
DB search
MTTITINEVGLRDGLQSLQVIMPTAAKRRWIDAAYGAGVRHMEVASFVPARLLPQMADAR
EVVAHALTYPDLQVTVLAPNLRGARDALESGAHRIVAPVSVSTAHSLANVRRTPVEMVEE
LGRMCQLRTEMGLHGVQVVAGMSVAFGCTRQGEVPLADLCALTRQVIEAGCDLVSLGDTT
GYANPGQVATVLQAVREIAGDRLKAAHFHDTRGLALANSLVAVQQGIGELDASLAGLGGC
PFAPGASGNTVTEDLVFMLQSMGYDTGIDLPALIETRQVLSEALPGEPLYGFIARAGLPL
NFANTHRHA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaataacaatcaatgaagtcggcctgcgcgatggcttgcagagcctgcaagtg
atcatgccgacagcagccaaacgccgctggatcgatgccgcttacggcgccggtgtgcgt
catatggaagtcgcttcgttcgtgccggcacgcttgctaccgcagatggccgatgcccgc
gaagtggtggcccacgccctcacgtacccggacctgcaagtaaccgtgctggctccgaac
cttcgtggcgcaagggacgcacttgaatcgggtgcacaccgcatcgtcgccccggtatcg
gtgagcacggcgcacagcctggccaacgtgcgccgcacgccagtggagatggtcgaggaa
ctggggcgcatgtgccagctgcgtactgaaatgggcctgcatggggtgcaagtcgtggcc
ggcatgtcggtggcctttggctgcacccgccagggcgaggtgccgctggctgacctgtgt
gcgttgacccgccaggtgatcgaagccggttgcgacctggtctccctgggagacaccact
ggctatgccaatccgggccaggtggcaacggtgcttcaggccgtacgggagattgcaggc
gaccgtctcaaggccgcgcacttccatgacacccggggcctggccttggccaacagcctg
gtggcggtgcagcagggcattggggaactggatgcctccctggcgggcctgggaggatgc
ccgttcgcccctggcgcgtctggaaataccgtgaccgaagacctggtgttcatgctgcaa
agcatgggttacgacaccggcatcgacttgcctgcactgatcgaaacccggcaggtacta
agcgaagcgctaccgggcgagccactttacggcttcatcgcccgggccggattgccgctc
aacttcgccaacacacaccgccacgcctga
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