Pseudomonas putida DOT-T1E: T1E_5362
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Entry
T1E_5362 CDS
T02181
Symbol
erfK
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppx01002
]
T1E_5362 (erfK)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppx01011
]
T1E_5362 (erfK)
Peptidases and inhibitors [BR:
ppx01002
]
Cysteine peptidases
Family C82
T1E_5362 (erfK)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppx01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
T1E_5362 (erfK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
AFO51183
UniProt:
I7BHB8
LinkDB
All DBs
Position
complement(5837534..5838511)
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AA seq
325 aa
AA seq
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MLPRFPAVTRSLSLAALLVAGPAAALELPLPPPGEDIVGQVHVIKAKYEDTFADIGTAND
LGYLEMIAANPGVDPWLPGAGTEIILPTRFVLPPGPREGIVINLAEYRMYYFPKGESVVY
TFPLGIGREGWGSPIANTKITAKTPNPTWTPPASIRKEHAEDGDILPTVVPAGPDNPLGP
FKFTLGVPGYLIHGSNKKFGIGMRTSHGCFRMLNNNVLELSKMVPVGTPVRIINEPYKFG
ISAGKVYLEAHTPLDDQGNPSVVDKHTAVINALLKREDLANNLRMNWDMVRDVVAAEDGM
PVEIAVPVENQGAAPMVSSIPPELQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgcgctttcctgccgtcacccgtagcctgtccctggccgccctgttggtagcg
ggccccgctgctgcgctggagctgccactgccaccgcccggtgaagacatcgtcggccaa
gtgcatgtgatcaaggcaaagtacgaggacacgttcgccgatatcggcaccgcaaacgac
ctcggctacctggaaatgattgccgccaaccccggcgtggacccttggctgccgggcgcc
ggcaccgagatcatcctgccgacccgtttcgttctgccgccggggccgcgcgaaggcatc
gtcatcaacctggccgagtaccgcatgtactacttccccaagggggagagcgtggtgtac
accttcccgctgggcattggtcgcgaggggtgggggtcgccgatcgccaacaccaagatc
accgccaagacgcccaacccgacctggacgccgcccgcttcgattcgcaaagagcacgct
gaggacggtgacatcctgccgacggtggtgccggctggcccggacaacccgctggggccg
ttcaagttcaccttgggcgtaccgggctatctgatccatggttcgaacaagaagttcggc
attggcatgcgcaccagtcacggctgcttccgcatgcttaacaacaacgtgcttgaactg
tcgaagatggtgccggtggggacgccagtgcgcatcatcaacgagccttacaagttcggt
atcagcgccggcaaggtctatcttgaggcacacacgccgctggatgaccagggtaacccg
tcagtggtcgacaaacacaccgcagttatcaatgccttgctcaagcgtgaagacctggcc
aataacctacgcatgaactgggacatggtacgtgacgtggtggctgcagaagatggcatg
ccggtagaaattgccgtgccggtggaaaaccaaggggccgcaccgatggtgtcgagcatt
ccgcccgaactgcagtaa
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