Paenibacillus polymyxa E681: PPE_00008
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Entry
PPE_00008 CDS
T01319
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppy
Paenibacillus polymyxa E681
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppy03032
]
PPE_00008
03400 DNA repair and recombination proteins [BR:
ppy03400
]
PPE_00008
Enzymes [BR:
ppy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PPE_00008
DNA replication proteins [BR:
ppy03032
]
Prokaryotic type
DNA Topoisomerases
PPE_00008
DNA repair and recombination proteins [BR:
ppy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PPE_00008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ADM67913
LinkDB
All DBs
Position
8196..10760
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AA seq
854 aa
AA seq
DB search
MADQNNSQIINRDIGVEMRESFMDYAMSIIVSRALPDVRDGLKPVHRRILYAMSELGMSP
DKPYKKSARIVGEVIGKYHPHGDTAVYDTMVRMAQDFSLRYMLVDGHGNFGSVDGDMAAA
MRYTEARLSKIAMEMLRDLNKETVDFMPNYDGEESEPVVLPARYPNLLVNGVGGIAVGMA
TNIPPHNLGEVIDGVQALIENPDITPMELMDYIQGPDFPTAGYILGRSGIRQAYQTGRGS
VTMRAKTTIEEIGNKARIIVHELPYQVNKARLVEKIAELVRDKRIEGITDLRDESDRTGM
RVVIELRRDVNPNVVLNNLFKHTAMQSNFGINMLAIVNNEPKILNLKDVLYHYLKHQVEV
IRRRTEFDLKKAEARAHILEGLRIALDHLDEVIALIRSSQTAEAAREGLIERFSLTLEQS
QAILDMRLQRLTGLEREKIENEYNELIQKIAEYREILANEHLVLNIISEELNELKERFAD
DRRTEITVGEESILDEDLIPREDVIITVTHTGYIKRLPVTTYRSQKRGGRGVVGMDTKDE
DFVEHLFITNSHHHLLFFTDKGKVYRIKAYEIPDLSRTARGTPIINLIQIEQGESINAVI
PIEEFVEDSYLFFATQHGIIKKTPLDDYANIRKGGLIAINLREDDALIEVKLTDGQQEMI
IGTAQGMSIRFPESDVRSMGRSATGVKGINLDESDAVIGMDIVDTSLDILIVTAKGYGKR
TPVVDYRIQSRGGKGIKTINVTDKNGPVVGLKVVKTEEDLMIITASGTLIRTSMGEISTM
GRNTQGVRLINIRDDDSVATVCRANKNEEQDELLEELLEDGEAGEGSSLSSVEPTLETNT
EGAESNDPESSEGE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaaaataactcgcaaatcatcaatagggatatcggagtggaaatgcgcgaa
tcctttatggattatgccatgagtattattgttagccgtgccttgcctgatgtgcgggac
ggactgaagccggtacaccgtcgtattttgtacgcgatgtctgagctaggcatgtcgcca
gataagccttacaaaaaatcggcaagaatcgtcggcgaagttatcggtaaatatcaccct
catggtgatacggctgtatatgatacgatggtgcggatggcgcaggatttttctttgcgt
tatatgttggtggatgggcacggtaactttggctccgtggatggagatatggcggctgcg
atgcgttacaccgaagcacggttgtccaagattgccatggaaatgctacgtgatttgaac
aaagagaccgttgattttatgccgaactacgatggtgaagagagcgagcctgtcgtatta
cctgcacggtatcctaacttgctggtgaatggtgtcggcggaattgcagtcggaatggct
accaatatccctccgcataacttgggagaggttatcgatggtgtacaagcattgatcgaa
aaccccgatattacgccgatggaacttatggattatattcaagggcccgatttcccgaca
gcaggttatattttgggacgctctggtatccgtcaggcgtaccagactggccgcggatct
gtgaccatgcgtgcgaagaccaccatagaagagattggcaataaagcacggattatcgtg
catgagctgccttaccaagtgaataaggctcgtctggtcgagaaaattgccgaattagta
cgtgacaaacgtattgaaggtattacggatcttcgggatgaatcggaccgtacgggtatg
cgtgtcgttatcgagttgcgtagggacgtgaacccgaacgtcgttctgaataatttgttt
aaacatacggctatgcagtcgaattttggtattaatatgcttgccattgtaaacaatgaa
ccgaagattttgaacctgaaggatgtcttgtatcattatctcaaacatcaggtcgaggtt
attcgtcgccggacagaatttgatctgaaaaaagccgaagctagagcacacattctggaa
ggcttgcgcattgcccttgaccatctggacgaagttattgctttgattcgttcttcccaa
actgcagaagcagctcgtgaaggactgattgagcgtttctcgctcactcttgagcagtct
caggctattctcgatatgcgtctgcaacgcttaaccggtttggaacgtgagaaaatcgag
aacgaatataacgagttaatacaaaagattgcggaataccgcgagattttggcgaacgag
catctggtactcaacatcattagcgaagagctgaatgaacttaaggaacgtttcgctgat
gaccgtcgcactgaaattacagtgggtgaagagagtattctggatgaggatctcattcca
cgtgaagatgttattattactgtaacccatacgggatatatcaaacgccttcctgttact
acctatcgcagtcaaaaacgcggtggtcgtggtgtagtgggtatggataccaaagatgag
gatttcgtagagcatctgttcattacgaattcacatcatcatttgttattctttaccgac
aagggcaaggtatatcggattaaggcctatgagattcctgatcttagccggacagcccgg
gggacaccgattattaacctgattcagattgaacagggtgagtcgatcaatgcggtaatt
ccgatcgaggaatttgtggaggatagctatcttttctttgcgacccagcatggaatcatt
aagaagacaccacttgacgactatgcaaatatccgcaaaggtggcttgattgccattaac
ttgcgtgaagatgacgccctgatcgaagtgaagctgacggacggacagcaggaaatgatt
attggtacagcacaaggtatgtctatccgtttccctgaaagtgatgtacggtctatgggc
cgtagcgctacaggggttaaagggatcaaccttgatgagagtgatgctgtaattggtatg
gacatcgtggataccagcctggatattctgatcgtaacggccaaaggttatggcaagcgt
acccctgttgtggattatcgtatccaaagccgtggaggtaaggggatcaagacgattaat
gttacggataaaaatggtccggttgtcggtctcaaggttgtaaaaaccgaagaagatctg
atgatcattacagctagtggcaccttgattcggactagcatgggggaaatctccacgatg
ggtcggaatacacaaggggtaaggctgattaatattcgcgatgatgattcggttgcaact
gtttgtcgagcgaacaagaatgaggagcaggatgaactgcttgaagaattattagaggat
ggggaagctggagagggctcatctctatcatctgttgaaccaactctcgaaacgaataca
gaaggtgcggaaagtaacgacccagaatcttctgagggcgaataa
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