Paenibacillus polymyxa E681: PPE_00143
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Entry
PPE_00143 CDS
T01319
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppy
Paenibacillus polymyxa E681
Pathway
ppy03030
DNA replication
ppy03430
Mismatch repair
ppy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPE_00143
03430 Mismatch repair
PPE_00143
03440 Homologous recombination
PPE_00143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppy03032
]
PPE_00143
03400 DNA repair and recombination proteins [BR:
ppy03400
]
PPE_00143
Enzymes [BR:
ppy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PPE_00143
DNA replication proteins [BR:
ppy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PPE_00143
DNA repair and recombination proteins [BR:
ppy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PPE_00143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_30
RuvB_N
DnaX_C
TIP49
AAA_5
AAA_16
AAA_22
AAA_19
RCF1-5-like_lid
AAA_7
AAA_14
AAA_2
AAA_assoc_2
End3
Rad17
nSTAND3
PIF1
AAA_28
Mg_chelatase
TsaE
AAA_24
RNA_helicase
DUF815
AAA_6
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADM68041
LinkDB
All DBs
Position
177016..178767
Genome browser
AA seq
583 aa
AA seq
DB search
MEHIALYRAWRPQAFKDMVGQQHIIQTLQNAIRENRTSHAYLFSGPRGTGKTSAAKILAK
AINCEHGPAPEPCNECEACKRITAGAVMDVQEIDAASNRGVEEIRDLRDKVKYAPTEVRH
KVYIIDEVHMLTTEAFNALLKTLEEPPPHVMFILATTEPHRIPATIISRCQRFDFRRVSL
EEQTERLDLICRQENIQADSDALQYIARLSDGGMRDAVSVLDQISSFTDGRVTYQQVLDM
TGGIASEQFGKLALALLKEDVGTVLQMIENFMQEGKSADKCMENLLYYFRDLLMIKMVPQ
ATKMTERVLDPERFKEVADAFTKEQLFAMIDTLNRYQSEMKYAVQPQTLFEVALLKLCSI
PGEAGTVAQPTAQRSGAAADQEDVVMLKRQLAELEKKLERALQGGLGVGAGQEASSGGRQ
ASGGRVPAPRISAPAKLPSQLDRYIAEKSSEAFAAAGRKWSQILQGVKEAKVTVHAWFMD
GEPVSVLEDSVLVAFKNNIHRETTEKPANKQVIEKVLHEQLGHPYRLVTMMQKDWNAAIE
GVSDQPAEELQLEPEHDAPGKSKEPWIDEAIQLFGEDLVVIKD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
ttggaacatatagcgttgtaccgtgcttggcggccgcaggctttcaaggacatggtagga
caacagcatattatccagacattgcagaatgccatccgcgaaaatcgcacgtcccatgcc
tatctgttcagcggtccacgaggaacaggtaagacgagtgcggccaaaattttggccaag
gcaatcaattgtgagcatggacctgcgccggaaccttgcaacgagtgcgaagcctgtaaa
cggatcacggccggagcggtcatggatgtacaggagattgatgcagcctctaatcggggc
gttgaagagattcgtgatttgcgcgataaagtcaaatatgcgcccacagaagtgcggcac
aaggtttatatcattgatgaagtgcacatgctgacgacggaagcgttcaatgcgctgctt
aagacgctggaagagccgccaccacacgtgatgttcatattggctacgactgaaccacat
cggattccggctacaattatatcacgttgccagcggtttgatttccggcgggtatcgctg
gaagaacagacagagcggcttgacctgatatgtcgacaggagaacatacaggctgattca
gatgcactgcagtacattgcgcgtctttcagatggcgggatgcgagatgcggttagcgtt
ttagatcagatatcctcgtttacagatggtcgggttacttatcagcaggtgctggatatg
acggggggtattgcgtccgagcaattcggtaagcttgccttggcattgctgaaagaagat
gtgggcacggtgctccaaatgatcgagaactttatgcaggaaggtaaaagtgcggataag
tgcatggagaatcttctgtactatttccgagatctgctaatgatcaagatggtgcctcag
gcgaccaaaatgacggagcgagtgctggatccagagcgatttaaggaagtggcagatgct
tttaccaaggagcaactctttgcgatgattgacactcttaatcggtatcagagcgagatg
aaatatgccgtacagccacaaactttgtttgaggtagctctattgaagctgtgcagtatt
ccgggggaagcaggaactgttgctcagccgaccgcacaacgctctggcgctgcagctgat
caggaagatgtggtaatgttgaagcgtcagcttgctgagctggaaaagaaactggagcgc
gcgctgcaaggtggattgggcgttggagcaggacaggaagcgtcgtcgggtggtcgtcag
gcttccgggggccgtgtccctgctccgcggatttcagcgccagccaaacttccttctcag
ttggatcgctatatcgctgagaagtcgagcgaagcattcgcagcagcaggacgtaagtgg
agccagattttacaaggggtaaaagaggcgaaagttacggttcatgcttggtttatggat
ggtgagccagtttctgtgttagaggacagtgtgctggttgcatttaagaacaatattcat
cgtgaaactaccgaaaagcctgccaataagcaggtcatcgagaaggtattgcatgagcag
ttgggtcatccttatcgtttagtaacgatgatgcaaaaggattggaatgctgcgattgaa
ggagtttccgaccagcctgccgaagaattgcagctggagccggagcatgatgcgccggga
aagtccaaagagccctggattgatgaagctattcaacttttcggggaagacctagtagtc
attaaagattga
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