Paenibacillus polymyxa E681: PPE_00241
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Entry
PPE_00241 CDS
T01319
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppy
Paenibacillus polymyxa E681
Pathway
ppy00040
Pentose and glucuronate interconversions
ppy01100
Metabolic pathways
ppy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PPE_00241
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPE_00241
Enzymes [BR:
ppy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PPE_00241
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Glyco_hydro_59_C
3keto-disac_hyd
Laminin_G_3
DUF6250
Laminin_G_1
Laminin_G_2
Beta_helix
SO2946-like_C
DUF5123
Motif
Other DBs
NCBI-ProteinID:
ADM68123
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Position
274658..276664
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AA seq
668 aa
AA seq
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MKSSLLKKCASVMLSSTLVLSLSLPLLGHAHADGNGSTYQQSSRSEGHSVKGNASWTNYS
VQADVYVNDFNGSNRVYVAGRYTDADNFYAASLYNKKDGALEIRKKVKGSMKTLATNKNY
KLDTNTWYRVKLELSGSEIKMYVNDQLELSATDTSLTAGAIGLVTSKAAAQFDNVIVSGA
SSEVDPGTPPVNPTPGTEQPTPGVNPDVTSKNNYNLTGFSYGNTGGGNIADTDANYKKVY
NAVDLNEALKKGSKVKVIEIMNDLDLGWNEIPSAAKVMPFSANNPVQTHPVLKKTGVSKV
YIENMNGVTIFSANGAKIKHAGFVIKRSSNLIFRNLEFDELWEWDEATKGNYDKNDWDYV
TIEGTSSKVWIDHCTFNKAYDGLVDVKKGSNGVTISWSLFKGDDRSSNSWVTQQVNAMEA
DKSSYPMYAYLRSSAVGMSKEDIIDIAAGQKKAHLIGATEMASDNADLEVTLHHNYYLDI
QDRMPRLRAGNAHAYNIVMDDAGLARAKKRITSDMAKAIAAKGYHFDVVGNGAISTENGA
VLLEKSYLIDMFSPVRNNQKDPNKADYTGKIKAEDVIFSDNGTVFRGGSDDANSPLAPYP
AKTKDFSWNGFTTLPYSYTAEDPANLVAQLQAKDGAGAGKLNWSSENWLKTVYNTSVAKN
AIVEEDSQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgagtctgttaaaaaaatgtgcaagtgtaatgttaagcagtacgttggtactg
tctttatcattgccgttgctaggccatgcacatgcggatgggaatggttctacataccaa
caatctagtcgaagcgaaggccattccgttaaaggtaatgcctcatggacgaactatagc
gtgcaagcagatgtatatgtaaatgattttaatggctccaatcgggtatacgttgcaggt
agatacacagatgccgataacttctatgccgcatcgttgtacaacaagaaagacggagct
cttgagattcggaaaaaagtaaaaggctctatgaagacactggctaccaacaagaattac
aaactggacacgaatacatggtacagagtcaagctggaactatccggttcggaaatcaaa
atgtatgtcaatgatcaattggagctgtccgcaacagacaccagcctcactgctggagcc
atcggtttggtaacctccaaagcagctgcccaattcgataatgtgattgtatccggtgct
tcttctgaggtagatccaggaacaccgcctgtgaacccaacaccaggtacagaacaaccg
actcctggagtgaaccctgatgtaacctctaaaaacaactataatttgactggcttttcg
tatgggaatacaggtggtggcaacattgcggatacagatgccaactacaaaaaggtttac
aacgctgtagatctcaacgaagcactgaagaaaggaagcaaagtcaaagtgattgagatt
atgaacgatcttgatctcggttggaatgaaattcctagcgctgccaaagtaatgcctttt
agtgccaacaatcctgtacagacgcatcctgttctgaaaaagacaggtgtgagtaaagtc
tatatcgaaaatatgaatggggttacgattttctctgccaatggtgcgaaaatcaaacat
gccggttttgtcatcaaaagaagctccaatttgattttccgtaacctcgaatttgatgag
ctttgggagtgggatgaagcaaccaaagggaactatgataagaatgactgggattatgtt
accatcgaaggtacaagttccaaggtatggatcgaccattgcacatttaacaaagcctat
gatggtctggtagatgtgaaaaaaggtagtaacggagttacgatttcctggtctttgttc
aaaggagatgaccgcagctccaacagctgggtaacccaacaagtcaacgcgatggaagca
gacaagtcttcctatcctatgtacgcttatctgagaagcagtgcagtaggcatgagtaaa
gaggatatcattgatattgcggcaggacaaaagaaagcgcatctgatcggtgctacggaa
atggcttccgacaatgcagacctggaggtgacgctgcatcataattactacctggatatt
caggatcgcatgcctcgtctgcgtgctggtaatgctcatgcgtataacatcgttatggat
gatgctggattggccagagccaaaaaaagaattacatccgacatggccaaagcgattgct
gccaaaggatatcattttgacgtcgtaggtaatggtgcaatttcaacagaaaacggcgcg
gtgttgctagaaaagtcttatttaattgatatgttttctccagtgcgtaataatcaaaaa
gatcctaacaaagcggattacacaggtaaaatcaaagccgaagacgttatcttttcggac
aacggtaccgtattcagagggggcagtgacgatgcgaatagcccgttagccccttatcct
gctaagaccaaggacttctcttggaatgggttcacaaccttgccatacagctatactgcc
gaagaccctgctaacctggttgctcaattgcaggccaaggatggagcgggtgcaggcaag
ctgaactggtcgagtgaaaactggctcaaaacggtgtacaatacgtctgttgcgaaaaat
gcaatagtggaagaagattcccaatag
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