Paenibacillus polymyxa E681: PPE_01596
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Entry
PPE_01596 CDS
T01319
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppy
Paenibacillus polymyxa E681
Pathway
ppy03030
DNA replication
ppy03410
Base excision repair
ppy03420
Nucleotide excision repair
ppy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPE_01596
03410 Base excision repair
PPE_01596
03420 Nucleotide excision repair
PPE_01596
03440 Homologous recombination
PPE_01596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppy03032
]
PPE_01596
03400 DNA repair and recombination proteins [BR:
ppy03400
]
PPE_01596
Enzymes [BR:
ppy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PPE_01596
DNA replication proteins [BR:
ppy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PPE_01596
DNA repair and recombination proteins [BR:
ppy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PPE_01596
NER (nucleotide excision repair)
GGR (global genome repair) factors
PPE_01596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
DNA_pol_A_exo1
HHH_2
HTH_60
Motif
Other DBs
NCBI-ProteinID:
ADM69435
LinkDB
All DBs
Position
1705719..1708373
Genome browser
AA seq
884 aa
AA seq
DB search
MDKLMLIDGNSIIYRAFFAMPPLTNSSGQQTNAVYGFTTMLLRLLEEHKPTHILVAFDAG
KITFRHKGYEDYKGGREKTPPELSQQFPLLKELLTAFGIAQFELDGYEADDIIGTLSKTA
DEAGFNVLIVTGDKDMLQLASDHVTVGLTRKGVTEVETYGPEQIQERYGLKPLQIIDLKG
LMGDTSDNIPGIPGVGEKTALKLLHQYGSVEEVLAHTNELKGKMKERVETHADDARMSKD
LATIYRDVTLDKQLDDVAFGGLQAETAGPALAKLEFKSLLERLSFSGEVGSTGVDVEEAA
ADVTVLDEQRISELVEVLDRVDVLHVETHGDNPHHADIVGLIFAATGQQFFMTLDVLQSD
AATPIRAWLADPERKKRGHDLHRTDLALHWHGIEFAGAEFDVQLAGYLLDPTDANQTLSG
LAAKYGLSSIRPDEEVFGKGAKYKVPDVDVLSDHVARKAAVIEALVPVQQAELEKTEMHK
LFHELEMPLSRILADMEKQGVLVNVEELRALGKEFEAQIATLVSEIYSIAGVEFNLNSPK
QLGEILFDKLGLPVIKKTKTGYSTDAEVLEKLAPYHDIVQNILQYRTIAKLQSTYVEGLL
KEISGKTGKVHTYFRQTVAATGRLSSQFPNLQNIPIRLEEGRKIRKVFVPSEPGWSILAA
DYSQIELRVLADISDDERLKEAFVHDMDIHTKTASDVFGVAAEDVDSNMRRSAKAVNFGI
VYGISDYGLSQNLNITRKEAARFIDQYFDVFQGVRRYMDDIVKDAKRDGYVKTLLERRRY
LPEINASNFNLRSFAERTAMNTPIQGTAADIIKLAMVQMDKVLRERNLRSRMLLQVHDEL
VFEVPPEEMETMKELVPATMEAALELAVPLKAEVSYGSNWYEAK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggataaactcatgcttatagatggtaacagtatcatttaccgggcgttttttgctatg
ccaccgttaacgaattcgagcgggcagcagacgaacgcggtgtacggatttacgacgatg
ttattgcggctcttggaggagcacaaaccaacacatattctggttgccttcgatgccggt
aaaataacgtttcgccataaaggatacgaggattacaaaggtggacgggagaaaacaccg
ccagagttgtcccagcaatttccgttgctcaaagagctattgaccgctttcggaattgcc
cagtttgaactggatggctatgaggcggacgatattataggcaccctgtccaagacagcg
gacgaagccggttttaatgtgctgatagtgaccggggacaaggatatgcttcaattggct
tcagaccatgtcacagtcggcttgacccgcaaaggggttactgaggtggagacgtatgga
cctgagcaaattcaggaacgatatggcctgaagccgctgcaaattattgaccttaagggt
ctgatgggcgatacgtcggacaatattcctggtattcccggcgtgggtgaaaaaacagcg
ctcaagctgctgcatcaatacggttcagtcgaagaagtgctggcgcacacgaatgagctg
aagggcaaaatgaaagaacgcgtagagacacatgctgacgacgcgcgaatgagcaaagat
ttagcgaccatttatcgagatgttacgttggacaagcagctggatgatgtggccttcggc
gggctgcaagcagaaacagccgggccagctctggcgaagctggagttcaagtccttgctg
gagcgtttatccttttcaggtgaggttggcagtaccggggtagacgtagaggaagccgcg
gctgacgtaacagtgctggatgagcagcggattagcgaattggtagaagtgttggatcgt
gtggatgtgctccatgtagagacgcatggtgataatccgcatcatgctgacatcgtaggt
ctgatatttgccgcaacgggacagcagttttttatgacactggatgtactgcaaagcgat
gcagctacacctattcgcgcatggcttgctgaccctgaacgcaaaaaacgcggtcatgat
ctgcatcgaacggatttggctttacactggcatggaattgagtttgcaggtgccgagttt
gatgtgcaactggcagggtacttgttggacccaaccgatgcaaaccagacattgagcgga
ttggcagccaaatatggcttgtcttcgatccgtccagacgaagaagtgttcggcaaagga
gctaaatataaagtccctgacgtggatgtactgtccgatcatgtggcgcgtaaggcagcg
gtgattgaagctttggtgcctgtgcagcaggctgagctggaaaaaacggaaatgcataag
ctgtttcatgagctggagatgccgttgtcccgtattttggcggatatggagaagcagggt
gttttggtgaacgtagaagaactgcgcgctttggggaaagaatttgaagcccagattgca
acgttggtgagtgaaatctacagcattgccggagtagagttcaatctaaattcgcccaag
cagttgggtgagattttgtttgataaactgggtttgcctgtcattaaaaagacgaaaacg
ggttactcgactgatgcagaggttctggaaaagctggccccctatcatgatattgtacaa
aacattttgcagtaccgtacaattgccaaactccaatcgacgtatgtcgaagggttgctt
aaagaaatttcggggaaaacgggtaaggtgcatacgtatttccggcagacggttgcagca
actggacgcttgagcagtcaatttccgaatttgcaaaacattccgattcgtcttgaagag
ggtcgtaaaatccgcaaagtgtttgttccgtccgaaccgggctggtctattttggcggca
gactactcacagattgagctgcgggtgctggctgatatttcggatgatgaacgtttaaag
gaagcttttgtccacgatatggacatccataccaagaccgcatccgatgtgtttggtgta
gcagcggaagatgtggactccaacatgcggcgttctgcgaaggcagtcaactttgggatt
gtctacggaatcagtgattatggtctgtcacaaaatttgaatattacgcggaaggaagcg
gctcgctttatcgaccagtattttgacgtgttccaaggcgttcgtcgttacatggatgat
attgtgaaggatgcgaagcgggacggctacgtaaaaacgctgttggaacgcagacgctat
ttaccggaaattaacgccagtaatttcaacctgcgttcattcgctgagcgtacagcgatg
aatacgccgatacaaggtaccgctgccgatattatcaagttggcgatggtacagatggat
aaggtgctacgtgaacgtaatcttcgcagcagaatgctgctccaagtacatgatgagctt
gtgttcgaggttccgcctgaggaaatggaaacgatgaaagagcttgtcccggctaccatg
gaagctgcattagagctggctgtgccgctcaaagccgaagtaagctatggcagcaattgg
tacgaggccaagtaa
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