Paenibacillus polymyxa E681: PPE_01790
Help
Entry
PPE_01790 CDS
T01319
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppy
Paenibacillus polymyxa E681
Pathway
ppy03420
Nucleotide excision repair
ppy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PPE_01790
03430 Mismatch repair
PPE_01790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppy03400
]
PPE_01790
Enzymes [BR:
ppy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PPE_01790
DNA repair and recombination proteins [BR:
ppy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PPE_01790
MMR (mismatch excision repair)
Other MMR factors
PPE_01790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_16
AAA_30
Viral_helicase1
SLFN-g3_helicase
DEAD
NACHT
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADM69626
LinkDB
All DBs
Position
1900871..1903249
Genome browser
AA seq
792 aa
AA seq
DB search
MPVTTEQQWNEEQRRVEDVTAVISGRIRKLETEVGSVRGDVVDMRKDFWDEVTINFSEAD
DVGETSTSLRQQSEILSERERRHKHSTEALGRLKKLLDSPYFARIDFAEEGQTAERVYLG
IASLLDNQDEEFLIYDWRAPISNLYYDNMPGPASYKTPAGEMEGELTLKRQFSIRDGQIR
FMFDTGVTIGDELLQAVLSRSSDAQMKSIVATIQREQNRIIRDDRSRMLIVQGAAGSGKT
SAALQRVAYLLYKYRDRLRADQVVLFSPNPMFNSYVSTVLPELGEENMLQATFQEYLERR
LGREFQLEDPFEQLEYVLSASLQPGYEARMEGIRFKSSKTFLHVITSYKTYLEQEGMRFK
PIRFQGREVVSVEQMARKFYEFDSTVRLANRLELLRDWMLKELARFGKEECSAPWVDQQM
DLMEPEDYQRAYNRMRRKSKNKGDTFDDFTREREILARMVVSDRLKPLRKWIKALRFVDT
TRLYSELFMNETLLSQLANHAELPVSWGEISRQTLERIQAGELAYEDVTPFLYLRELMLG
FRSNSNIRHVFIDEAQDYSPFQLAFFKRLFPQAKMTALGDFNQAIYAHASVLQDAEPLYD
LYGADQTEMISLTRSYRSTQEIVEFTRGMVAGGEHIVPFNRKGEKPLVTEVRSREKLHQQ
IAANVTELLAEGYESIAVICKNADESAAAYEALEGKLSVKPKLIKKTTPAFEKGIHIIPA
YLAKGVEFDAVLIYDGSAKQYQRESERKLFYTACTRAMHLLHIYSIGEITPFVSLRDSDT
YTRKVEESDRVL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgactactgaacagcaatggaatgaagaacaacgaagagtagaagatgtgacc
gcagtgattagcgggcgtattcggaagctagagacagaggttggttctgtgcgcggagat
gtcgtcgatatgcgtaaagacttctgggatgaggtaacgatcaattttagtgaggcggat
gatgtgggcgagacgtccaccagtttgcgtcagcagtctgagattttgtctgagcgggaa
cgaagacacaagcattctacagaggcgttaggtcgtttgaaaaagttgcttgattcaccg
tattttgcacgcattgattttgctgaggaagggcagactgcggaacgtgtttatctgggg
attgcctccttgctggataatcaagatgaggagtttctgatctacgactggcgcgcacct
atttccaatctttattacgataacatgccggggcccgcttcatataagaccccggcaggg
gagatggaaggggaactcacgctcaagcgtcaattctcgatccgtgatggacagatccgt
tttatgttcgatacaggggtgacgattggagacgaacttcttcaagccgtattgagccgt
agctcggatgctcaaatgaaaagtatagtcgctaccatccaaagggagcagaatcgcatc
atccgtgatgatcgaagccggatgctcattgttcagggggccgcaggaagtggcaaaacc
tctgctgcgcttcagagagtagcgtatttgctgtataagtaccgggatcgcttacgagcg
gatcaggtcgtgttattttcgcctaacccgatgttcaacagttatgtatcgacagtatta
cctgaattgggcgaggaaaatatgcttcaggccacgtttcaggaatatttggagcggcgt
ttaggccgggagtttcagttagaagatccatttgaacagctggaatatgtgctttcagcg
tcgttacagcctgggtatgaagccaggatggagggtatccgctttaagtcgtccaagacg
ttcttacatgtgattacaagctacaagacgtatttggaacaggagggaatgcgttttaaa
cccatccgctttcagggacgtgaggtggtttcagtagagcaaatggcacgcaagttttat
gaattcgattctacggtgcggctggccaaccgattggaactgctgcgggattggatgctc
aaagagctggcccgctttggtaaggaagaatgctccgccccatgggtggatcaacagatg
gatctgatggagccggaggattatcagcgtgcctataaccgcatgcgccgtaaatccaag
aataagggcgataccttcgacgattttacgcgtgaaagagaaatattggcgcgtatggtg
gtcagtgaccgcttaaagcccctgcgcaaatggattaaggcgcttcgcttcgtagatacg
acacggctctacagcgagctgtttatgaacgagacgctgctgagccaactggcgaatcat
gcagagctgcccgtcagctggggtgaaattagtcgacaaactctggaacgaattcaggct
ggggagttagcgtatgaggatgtgacaccttttttatatttacgtgagctgatgctgggt
ttccgttccaatagcaacatccgtcacgtgtttattgatgaggcacaggactattcccca
ttccagctggctttcttcaagcgcttatttccacaggctaaaatgacagcactgggtgat
tttaatcaggctatctatgcccatgcctcggtgcttcaggatgcagagccattgtatgac
ttgtatggtgcagatcagaccgaaatgatttccctgacacgcagctatcgctcaacacag
gagattgtggaatttacccgggggatggtcgctgggggagagcacattgtaccgtttaac
cgtaagggtgagaagcctcttgtaaccgaggtgcgttcacgtgaaaagttgcatcaacag
atagctgcgaatgtcacagaattgttggcagaaggctatgaatccatcgcggtgatctgt
aaaaatgctgacgaaagcgcggcagcctacgaagcgctggaaggaaagctgtcagtgaag
ccaaaattaattaagaaaacaacacctgctttcgaaaaggggattcatatcattccggcc
tacctggcaaaaggggtggaattcgatgcggtcctgatttatgacggatcagcgaaacaa
taccagcgtgagagtgagcgtaagttattctacaccgcctgtacgcgagcgatgcatctg
ctgcatatttatagcataggggagattacgccattcgtgagtttacgggattcggatacg
tatacccgcaaagtggaagaaagtgatcgtgttctatag
DBGET
integrated database retrieval system
