Paenibacillus polymyxa E681: PPE_01912
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Entry
PPE_01912 CDS
T01319
Name
(GenBank) RNA polymerase sigma factor SigD
KO
K02405
RNA polymerase sigma factor FliA
Organism
ppy
Paenibacillus polymyxa E681
Pathway
ppy02020
Two-component system
ppy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPE_01912
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PPE_01912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppy03021
]
PPE_01912
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppy02035
]
PPE_01912
Transcription machinery [BR:
ppy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PPE_01912
Bacterial motility proteins [BR:
ppy02035
]
Flagellar system
Flagellar assembly proteins
Stator
PPE_01912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
PhyR_sigma-like
HTH_38
HTH_23
Sigma70_ECF
CtpB_N-like
7TMR-HDED
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
ADM69748
LinkDB
All DBs
Position
2030572..2031360
Genome browser
AA seq
262 aa
AA seq
DB search
MNERKAAHLNHSELWEQWKEHGDKEAKKQLIEKYLHIVEYVSGRLAVGLPKNVSKDDLAS
NGVMGLIDALEKFDYERGLQFETYASWRVRGAILDGLRQGDWVPRSVREKAKKIEDAYQH
LEQRYLRTVSDEEMSHYLDVSEKEFQNMIQEVAVMSIVSLEDPIREEESETRLSLLVDEK
AKNPDHKVNEFTLRDALAQGIDKLTEKERIVVSLLYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRATLDKQRDLLMRKD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcgaaaagccgctcatttaaaccattccgaactatgggaacaatggaaagaa
cacggtgacaaggaagcaaaaaaacagttaattgaaaaatatctccatattgtggaatat
gtgtcaggccgtcttgcagtaggcttgcctaaaaatgtatccaaggatgatctggcgagt
aacggcgttatgggtttgattgacgctttagagaaatttgactatgagcgtggtttgcag
tttgagacctatgcttcttggcgtgttcgtggagcgattttggatggtcttcgtcaaggg
gattgggttcctcgttcagttagggaaaaagcgaaaaaaatcgaggatgcctaccagcat
ttggaacaaagatatctacgcacggtaagcgacgaagagatgagtcattatttggacgtt
tctgagaaagagtttcaaaatatgatccaggaggtcgccgttatgtcgattgtctcactg
gaggacccgatccgcgaagaggaatcggaaacacggctttcccttttggtagacgagaag
gcgaaaaatccggatcataaggtcaatgaatttacacttcgtgatgcccttgcacaaggc
attgataaattgactgaaaaagaacgtatcgttgtttctttattgtattacgaggatttg
tcactcagcgaaatcgctgaggtcatgtcgctatctccatcgcgaatttcacagttgcat
tccaaagcaatattacgtttgagagcgacattggacaaacaacgggatttgctaatgcgt
aaagattaa
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